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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4jdrFADDihydrolipoyl dehydrogenase1.8.1.4

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4jdrFADDihydrolipoyl dehydrogenase1.8.1.41.000
4jq9FADDihydrolipoyl dehydrogenase/0.629
2eq9FADDihydrolipoyl dehydrogenase/0.518
1lpfFADDihydrolipoyl dehydrogenase1.8.1.40.499
1zy8FADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.485
3rnmFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.473
2f5zFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.470
3ladFADDihydrolipoyl dehydrogenase/0.465
2yquFADDihydrolipoyl dehydrogenase/0.452
3icrFADCoenzyme A disulfide reductase/0.452
1jehFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.448
1zmcFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.447
2qaeFADDihydrolipoyl dehydrogenase1.8.1.40.447
1zk7FADMercuric reductase1.16.1.10.444