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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3urhFADDihydrolipoyl dehydrogenase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3urhFADDihydrolipoyl dehydrogenase/1.000
2qaeFADDihydrolipoyl dehydrogenase1.8.1.40.561
2yquFADDihydrolipoyl dehydrogenase/0.561
1jehFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.552
2f5zFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.536
2eq9FADDihydrolipoyl dehydrogenase/0.531
3ladFADDihydrolipoyl dehydrogenase/0.514
1zy8FADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.503
4jq9FADDihydrolipoyl dehydrogenase/0.503
1zk7FADMercuric reductase1.16.1.10.500
1zmcFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.496
1lpfFADDihydrolipoyl dehydrogenase1.8.1.40.492
1zx9FADMercuric reductase1.16.1.10.488
4jdrFADDihydrolipoyl dehydrogenase1.8.1.40.488
3cgcFADCoenzyme A disulfide reductase/0.450
4m52FADDihydrolipoyl dehydrogenase1.8.1.40.447
3ic9FADPutative dihydrolipoamide dehydrogenase/0.443
2r9zFADGlutathione amide reductase/0.442