Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3pz43PZProtein farnesyltransferase subunit beta2.5.1.58

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3pz43PZProtein farnesyltransferase subunit beta2.5.1.581.000
1s63778Protein farnesyltransferase subunit beta2.5.1.580.512
3e33ED7Protein farnesyltransferase subunit beta2.5.1.580.494
1nl4HFPProtein farnesyltransferase subunit beta2.5.1.580.491
3e30ED4Protein farnesyltransferase subunit beta2.5.1.580.491
1sa5BMVProtein farnesyltransferase subunit beta2.5.1.580.490
1o1s1NHProtein farnesyltransferase subunit beta2.5.1.580.489
1mzcBNEProtein farnesyltransferase subunit beta2.5.1.580.485
1sa4JANProtein farnesyltransferase subunit beta2.5.1.580.478
1jcq739Protein farnesyltransferase subunit beta2.5.1.580.476
1n95HFPProtein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha/0.475
1n95HFPProtein farnesyltransferase subunit beta2.5.1.580.475
4gto7TOProtein farnesyltransferase subunit beta2.5.1.580.469
1n95FTHProtein farnesyltransferase subunit beta2.5.1.580.467
2h6iCYS_VAL_LEU_SER_GERProtein farnesyltransferase subunit beta2.5.1.580.462
3ksqZ96Protein farnesyltransferase subunit beta2.5.1.580.460
1ld8U49Protein farnesyltransferase subunit beta2.5.1.580.455
4gtr7TRProtein farnesyltransferase subunit beta2.5.1.580.450