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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3ladFADDihydrolipoyl dehydrogenase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3ladFADDihydrolipoyl dehydrogenase/1.000
2qaeFADDihydrolipoyl dehydrogenase1.8.1.40.566
1lpfFADDihydrolipoyl dehydrogenase1.8.1.40.555
2f5zFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.512
2eq9FADDihydrolipoyl dehydrogenase/0.499
2yquFADDihydrolipoyl dehydrogenase/0.492
3rnmFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.489
4jq9FADDihydrolipoyl dehydrogenase/0.487
1zy8FADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.483
1jehFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.465
1zk7FADMercuric reductase1.16.1.10.463
1zx9FADMercuric reductase1.16.1.10.461
4jdrFADDihydrolipoyl dehydrogenase1.8.1.40.457
4m52FADDihydrolipoyl dehydrogenase1.8.1.40.450
2eq6FADDihydrolipoyl dehydrogenase/0.449
1zmcFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.447
3urhFADDihydrolipoyl dehydrogenase/0.445