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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3fpkFADFerredoxin-NADP reductase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3fpkFADFerredoxin-NADP reductase/1.000
4uajFADNa(+)-translocating NADH-quinone reductase subunit F/0.576
4af7FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.540
3vo2FADFerredoxin--NADP reductase/0.532
1tllFADNitric oxide synthase, brain1.14.13.390.529
2r6hFADNa(+)-translocating NADH-quinone reductase subunit F/0.529
3ojxFADNADPH--cytochrome P450 reductase/0.528
2b5oFADFerredoxin--NADP reductase1.18.1.20.517
1gawFADFerredoxin/0.515
3w5uFADFerredoxin/0.513
1gjrFADFerredoxin--NADP reductase1.18.1.20.510
1w35FADFerredoxin--NADP reductase1.18.1.20.509
1w87FADFerredoxin--NADP reductase1.18.1.20.508
3zc3FADFerredoxin--NADP reductase1.18.1.20.508
4af6FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.508
3mhpFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.506
1krhFADBenzoate 1,2-dioxygenase electron transfer component1.18.1.30.501
1bx1FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.494
1fdrFADFerredoxin--NADP reductase1.18.1.20.494
1gvhFADFlavohemoprotein/0.492
3qfsFADNADPH--cytochrome P450 reductase/0.492
1bjkFADFerredoxin--NADP reductase1.18.1.20.489
3zbtFADFerredoxin--NADP reductase1.18.1.20.489
1amoFADNADPH--cytochrome P450 reductase/0.487
1fncFDAFerredoxin--NADP reductase, chloroplastic1.18.1.20.487
1f20FADNitric oxide synthase, brain1.14.13.390.486
1qh0FADFerredoxin--NADP reductase1.18.1.20.485
1sm4FADFerredoxin--NADP reductase/0.484
2vnjFADNADPH:ferredoxin reductase/0.484
1a8pFADFerredoxin--NADP reductase/0.483
1ewyFADFerredoxin--NADP reductase1.18.1.20.482
1fnbFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.481
1gaqFADFerredoxin/0.481
1e64FADFerredoxin--NADP reductase1.18.1.20.479
4fk8FADFerredoxin--NADP reductase/0.478
1h42FADFerredoxin--NADP reductase1.18.1.20.475
2rc6FADFerredoxin--NADP reductase/0.475
3crzFADFerredoxin--NADP+ reductase/0.474
1queFADFerredoxin--NADP reductase1.18.1.20.468
2piaFMNPhthalate dioxygenase reductase/0.468
3qfcFADNADPH--cytochrome P450 reductase/0.468
4c43FADFerredoxin--NADP reductase1.18.1.20.468
4bprFADFerredoxin--NADP reductase1.18.1.20.467
1ja1FADNADPH--cytochrome P450 reductase/0.466
1cqxFADFlavohemoprotein/0.465
1j9zFADNADPH--cytochrome P450 reductase/0.465
2bgiFADNADPH:ferredoxin reductase/0.461
2vnkFADNADPH:ferredoxin reductase/0.458
1ogiFADFerredoxin--NADP reductase1.18.1.20.456
1fndFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.454
2ok8FADFerredoxin--NADP reductase, apicoplast/0.454
1qgyFADFerredoxin--NADP reductase1.18.1.20.452
1go2FADFerredoxin--NADP reductase1.18.1.20.449
4k1xFADNADPH:ferredoxin reductase/0.449
1b2rFADFerredoxin--NADP reductase1.18.1.20.448
1h85FADFerredoxin--NADP reductase1.18.1.20.446
4yaoFADNADPH--cytochrome P450 reductase/0.444
1e63FADFerredoxin--NADP reductase1.18.1.20.443
3qe2FADNADPH--cytochrome P450 reductase/0.440