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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.538
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.517
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.504
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.500
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.493
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.488
3e8eG98cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.487
2vo0M03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.486
2c1aI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.481
3zo1SIJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.480
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.479
2vnwM01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.476
1q8wM77cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.475
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.473
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.472
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.471
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.469
2uw5GVNcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.468
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.467
2uw7GVPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.467
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.461
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.460
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.458
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
2vo3M04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.453
1ydrIQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.443
3cqwCQWRAC-alpha serine/threonine-protein kinase2.7.11.10.441