Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3cow52HPantothenate synthetase6.3.2.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3cow52HPantothenate synthetase6.3.2.11.000
3ivxFG6Pantothenate synthetase6.3.2.10.638
1n2iPAJPantothenate synthetase6.3.2.10.615
1n2hPAJPantothenate synthetase6.3.2.10.597
3ioeA7DPantothenate synthetase6.3.2.10.585
1n2jPAFPantothenate synthetase6.3.2.10.531
3coy53HPantothenate synthetase6.3.2.10.516
1n2gAPCPantothenate synthetase6.3.2.10.486
1n2bPAFPantothenate synthetase6.3.2.10.477
3coz54HPantothenate synthetase6.3.2.10.470
1n2eAPCPantothenate synthetase6.3.2.10.469
2x3fAPCPantothenate synthetase/0.469
3iocA5DPantothenate synthetase6.3.2.10.464
3ivgFG5Pantothenate synthetase6.3.2.10.450
4ddhMS0Pantothenate synthetase6.3.2.10.447
3isjA8DPantothenate synthetase6.3.2.10.443