sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3be9 | P04 | Casein kinase II subunit alpha | 2.7.11.1 |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 3be9 | P04 | Casein kinase II subunit alpha | 2.7.11.1 | 1.000 | |
| 2pvl | P55 | Casein kinase II subunit alpha | 2.7.11.1 | 0.631 | |
| 4anm | WUL | Casein kinase II subunit alpha | 2.7.11.1 | 0.630 | |
| 4dgn | LU2 | Casein kinase II subunit alpha | 2.7.11.1 | 0.620 | |
| 1om1 | IQA | Casein kinase II subunit alpha | 2.7.11.1 | 0.600 | |
| 4dgm | AGI | Casein kinase II subunit alpha | 2.7.11.1 | 0.595 | |
| 2pvm | P29 | Casein kinase II subunit alpha | 2.7.11.1 | 0.570 | |
| 1daw | ANP | Casein kinase II subunit alpha | 2.7.11.1 | 0.544 | |
| 1m2p | HNA | Casein kinase II subunit alpha | 2.7.11.1 | 0.542 | |
| 1day | GNP | Casein kinase II subunit alpha | 2.7.11.1 | 0.536 | |
| 4grb | 0XG | Casein kinase II subunit alpha | 2.7.11.1 | 0.534 | |
| 2pvh | P19 | Casein kinase II subunit alpha | 2.7.11.1 | 0.532 | |
| 3q9x | EMO | Casein kinase II subunit alpha | 2.7.11.1 | 0.528 | |
| 3ofm | 4B0 | Casein kinase II subunit alpha' | 2.7.11.1 | 0.517 | |
| 3u4u | LNH | Casein kinase II subunit alpha | 2.7.11.1 | 0.517 | |
| 2pvn | P63 | Casein kinase II subunit alpha | 2.7.11.1 | 0.507 | |
| 2pvj | P44 | Casein kinase II subunit alpha | 2.7.11.1 | 0.501 | |
| 3at4 | CCK | Casein kinase II subunit alpha | 2.7.11.1 | 0.491 | |
| 4dgo | 0JW | Casein kinase II subunit alpha | 2.7.11.1 | 0.483 | |
| 5cvf | ATP | Casein kinase II subunit alpha | 2.7.11.1 | 0.477 | |
| 3axw | TID | Casein kinase II subunit alpha | 2.7.11.1 | 0.475 | |
| 3pe2 | E1B | Casein kinase II subunit alpha | 2.7.11.1 | 0.461 | |
| 4aqc | 88A | Tyrosine-protein kinase JAK2 | / | 0.455 | |
| 3s1h | 56Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.447 | |
| 3rak | 03Z | Cyclin-dependent kinase 2 | 2.7.11.22 | 0.445 | |
| 1m2q | MNX | Casein kinase II subunit alpha | 2.7.11.1 | 0.443 | |
| 1m2r | MNY | Casein kinase II subunit alpha | 2.7.11.1 | 0.443 | |
| 3c0g | 3AM | Peripheral plasma membrane protein CASK | 2.7.11.1 | 0.443 | |
| 3zc6 | VFC | Tyrosine-protein kinase JAK3 | 2.7.10.2 | 0.443 | |
| 1lp4 | ANP | Casein kinase II subunit alpha | 2.7.11.1 | 0.442 | |
| 4hge | 15V | Tyrosine-protein kinase JAK2 | / | 0.441 | |
| 4hvi | 19S | Tyrosine-protein kinase JAK3 | 2.7.10.2 | 0.440 |