Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2z1xPRFQueuine tRNA-ribosyltransferase2.4.2.29

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2z1xPRFQueuine tRNA-ribosyltransferase2.4.2.291.000
1y5wNEZQueuine tRNA-ribosyltransferase2.4.2.290.615
3ge7AFQQueuine tRNA-ribosyltransferase2.4.2.290.604
1efzPRFQueuine tRNA-ribosyltransferase2.4.2.290.599
3gc4AAQQueuine tRNA-ribosyltransferase2.4.2.290.599
1q63AIQQueuine tRNA-ribosyltransferase2.4.2.290.590
2bbf344Queuine tRNA-ribosyltransferase2.4.2.290.589
1y5xE89Queuine tRNA-ribosyltransferase2.4.2.290.585
1ozqPRFQueuine tRNA-ribosyltransferase2.4.2.290.580
4gcxPRFQueuine tRNA-ribosyltransferase2.4.2.290.576
3gc52MQQueuine tRNA-ribosyltransferase2.4.2.290.574
4gh10WXQueuine tRNA-ribosyltransferase2.4.2.290.565
2qzrS79Queuine tRNA-ribosyltransferase2.4.2.290.560
1q4wDQUQueuine tRNA-ribosyltransferase2.4.2.290.550
3sm0AEKQueuine tRNA-ribosyltransferase2.4.2.290.545
1p0ePRFQueuine tRNA-ribosyltransferase2.4.2.290.540
4gi40EXQueuine tRNA-ribosyltransferase2.4.2.290.537
1y5vNE8Queuine tRNA-ribosyltransferase2.4.2.290.532
2z1wBDIQueuine tRNA-ribosyltransferase2.4.2.290.528
4gh30EVQueuine tRNA-ribosyltransferase2.4.2.290.527
4fps0UXQueuine tRNA-ribosyltransferase2.4.2.290.513
4fr10V2Queuine tRNA-ribosyltransferase2.4.2.290.507
2potGUNQueuine tRNA-ribosyltransferase2.4.2.290.506
1r5yDQUQueuine tRNA-ribosyltransferase2.4.2.290.504
4hqvQEIQueuine tRNA-ribosyltransferase2.4.2.290.504
4fsa0V3Queuine tRNA-ribosyltransferase2.4.2.290.493
4giy0WYQueuine tRNA-ribosyltransferase2.4.2.290.492
4q8pCKRQueuine tRNA-ribosyltransferase2.4.2.290.490
4gg90WWQueuine tRNA-ribosyltransferase2.4.2.290.489
1k4hAPQQueuine tRNA-ribosyltransferase2.4.2.290.484
1f3eDPZQueuine tRNA-ribosyltransferase2.4.2.290.480
4hvxQEIQueuine tRNA-ribosyltransferase2.4.2.290.476
4gkt0O1Queuine tRNA-ribosyltransferase2.4.2.290.475
1n2vBDIQueuine tRNA-ribosyltransferase2.4.2.290.474
4hshQEIQueuine tRNA-ribosyltransferase2.4.2.290.473
1q66KMBQueuine tRNA-ribosyltransferase2.4.2.290.467
1k4gAIQQueuine tRNA-ribosyltransferase2.4.2.290.462
4ugaH4BNitric oxide synthase oxygenase1.14.13.1650.456
1q65BHBQueuine tRNA-ribosyltransferase2.4.2.290.455
4ug5H4BNitric oxide synthase oxygenase1.14.13.1650.444
4ug7H4BNitric oxide synthase oxygenase1.14.13.1650.444
4ug91EWNitric oxide synthase oxygenase1.14.13.1650.444