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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2yquFADDihydrolipoyl dehydrogenase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2yquFADDihydrolipoyl dehydrogenase/1.000
2f5zFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.572
2qaeFADDihydrolipoyl dehydrogenase1.8.1.40.566
3rnmFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.560
4jq9FADDihydrolipoyl dehydrogenase/0.528
1zy8FADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.517
2eq9FADDihydrolipoyl dehydrogenase/0.513
1jehFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.507
1zmcFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.494
3ladFADDihydrolipoyl dehydrogenase/0.491
3urhFADDihydrolipoyl dehydrogenase/0.490
4jdrFADDihydrolipoyl dehydrogenase1.8.1.40.469
1lpfFADDihydrolipoyl dehydrogenase1.8.1.40.460
2eq6FADDihydrolipoyl dehydrogenase/0.442
3icrFADCoenzyme A disulfide reductase/0.442
1zk7FADMercuric reductase1.16.1.10.440