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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2jdtI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
2vo0M03cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.567
2c1aI5ScAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.557
1xh6R94cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.551
2vo3M04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.551
2f7e2EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.549
2uzuL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.546
3dndLL2cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.546
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.545
3zo1SIJcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.544
2vo6M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.541
1xh7R96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.538
2vnwM01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.538
2uw5GVNcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.532
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.531
2uw7GVPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.523
2uw0GVKcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.518
2uw6GVOcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.512
1q8uH52cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.508
3vqhIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.506
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.501
2oh02PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.495
1xh5R68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.493
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.493
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.493
3ow3SMYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.491
1svhI08cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.490
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.485
1xhaR68cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.484
1q8wM77cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.481
3zo4QWIcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.481
1xh8R55cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.478
1xh9R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.474
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.473
4axaRKDcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.463
1sveI01cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.458
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.457
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.456
1q8tY27cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.453
1xh4R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.452
1ydrIQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.452
2uztSS3cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.441