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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2eq7FADDihydrolipoyl dehydrogenase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2eq7FADDihydrolipoyl dehydrogenase/1.000
1jehFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.500
1zmcFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.484
1zmdFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.483
4jq9FADDihydrolipoyl dehydrogenase/0.480
3urhFADDihydrolipoyl dehydrogenase/0.479
3ladFADDihydrolipoyl dehydrogenase/0.468
1zk7FADMercuric reductase1.16.1.10.457
4jdrFADDihydrolipoyl dehydrogenase1.8.1.40.456
1geuFADGlutathione reductase1.8.1.70.455
1lpfFADDihydrolipoyl dehydrogenase1.8.1.40.449
1lvlFADDihydrolipoyl dehydrogenase1.8.1.40.446