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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1hldNADAlcohol dehydrogenase E chain1.1.1.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
1hldNADAlcohol dehydrogenase E chain1.1.1.11.000
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.624
4nfhNAJAlcohol dehydrogenase E chain1.1.1.10.611
1ht0NADAlcohol dehydrogenase 1C1.1.1.10.601
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.590
1u3vNADAlcohol dehydrogenase 1B1.1.1.10.585
2oxiNADAlcohol dehydrogenase E chain1.1.1.10.543
2ohxNADAlcohol dehydrogenase E chain1.1.1.10.505
5kjcNAJAlcohol dehydrogenase E chain1.1.1.10.500
1hszNADAlcohol dehydrogenase 1B1.1.1.10.494
1hetNADAlcohol dehydrogenase E chain1.1.1.10.492
5kjeNAJAlcohol dehydrogenase E chain1.1.1.10.492
5kj6NAJAlcohol dehydrogenase E chain1.1.1.10.491
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.10.487
3oq6NAJAlcohol dehydrogenase E chain1.1.1.10.485
4dl9NADS-(hydroxymethyl)glutathione dehydrogenase/0.483
4xd2NAIAlcohol dehydrogenase E chain1.1.1.10.481
5cdgNAJAlcohol dehydrogenase E chain1.1.1.10.480
2jhfNADAlcohol dehydrogenase E chain1.1.1.10.473
3ukoNADAlcohol dehydrogenase class-3/0.472
1adbCNDAlcohol dehydrogenase E chain1.1.1.10.465
4dlbNADS-(hydroxymethyl)glutathione dehydrogenase/0.464
1a71NADAlcohol dehydrogenase E chain1.1.1.10.461
4c4oNADSADH/0.460
1adcPADAlcohol dehydrogenase E chain1.1.1.10.459
1axgNADAlcohol dehydrogenase E chain1.1.1.10.457
5kcpNAJAlcohol dehydrogenase E chain1.1.1.10.453
1ma0NADAlcohol dehydrogenase class-31.1.1.10.449
4jjiNADAlcohol dehydrogenase class-3/0.449
1axeNADAlcohol dehydrogenase E chain1.1.1.10.446
1ldeNADAlcohol dehydrogenase E chain1.1.1.10.446
2fzeAPRAlcohol dehydrogenase class-31.1.1.10.445
5cdsNAJAlcohol dehydrogenase E chain1.1.1.10.442