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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
5adhAPRAlcohol dehydrogenase E chain1.1.1.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
5adhAPRAlcohol dehydrogenase E chain1.1.1.11.000
1a72PADAlcohol dehydrogenase E chain1.1.1.10.551
1qlhNADAlcohol dehydrogenase E chain1.1.1.10.503
1adfTADAlcohol dehydrogenase E chain1.1.1.10.488
1heuNADAlcohol dehydrogenase E chain1.1.1.10.486
1f8fNADBenzyl alcohol dehydrogenase/0.480
1e3eNAIAlcohol dehydrogenase 41.1.1.10.466
4xd2NAIAlcohol dehydrogenase E chain1.1.1.10.466
1mp0NADAlcohol dehydrogenase class-31.1.1.10.465
1tehNADAlcohol dehydrogenase class-31.1.1.10.463
1ma0NADAlcohol dehydrogenase class-31.1.1.10.459
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.458
5kjcNAJAlcohol dehydrogenase E chain1.1.1.10.458
4gl4NAIAlcohol dehydrogenase class-3/0.457
3oq6NAJAlcohol dehydrogenase E chain1.1.1.10.454
5dp2NAPCurF/0.450
5kjfNAJAlcohol dehydrogenase E chain1.1.1.10.450
1ju9NADAlcohol dehydrogenase E chain1.1.1.10.446
1ldeNADAlcohol dehydrogenase E chain1.1.1.10.444
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.443
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.10.442
4rquNADAlcohol dehydrogenase class-P/0.442
1e3lNADAlcohol dehydrogenase 41.1.1.10.441
1cdoNADAlcohol dehydrogenase 11.1.1.10.440