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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4g2gTDHMycocyclosin synthase1.14.21.9

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4g2gTDHMycocyclosin synthase1.14.21.91.000
4ktkKTKCytochrome P450/0.856
4g47TZFMycocyclosin synthase1.14.21.90.840
4g48PZBMycocyclosin synthase1.14.21.90.688
4ktl1CQCytochrome P450/0.675
4ips1G4Mycocyclosin synthase1.14.21.90.663
4ktf1TMCytochrome P450/0.660
3g5hYTTMycocyclosin synthase1.14.21.90.655
4ipw1G7Mycocyclosin synthase1.14.21.90.628
4iq71G9Mycocyclosin synthase1.14.21.90.624
4ict1EDMycocyclosin synthase1.14.21.90.616
2ij7TPFMycocyclosin synthase1.14.21.90.565
2pnjCHDFerrochelatase, mitochondrial4.99.1.10.488
2hrcCHDFerrochelatase, mitochondrial4.99.1.10.467
2po7CHDFerrochelatase, mitochondrial4.99.1.10.456
1fm4DXCMajor pollen allergen Bet v 1-L/0.449
1iolESTEstradiol 17-beta-dehydrogenase 11.1.1.620.444
3w1wCHDFerrochelatase, mitochondrial4.99.1.10.443
4bgePYWEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.443
1kbqFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.442
2qd3CHDFerrochelatase, mitochondrial4.99.1.10.442