1.500 Å
X-ray
2012-07-16
Name: | Mycocyclosin synthase |
---|---|
ID: | CP121_MYCTU |
AC: | P9WPP7 |
Organism: | Mycobacterium tuberculosis |
Reign: | Bacteria |
TaxID: | 83332 |
EC Number: | 1.14.21.9 |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 14.223 |
---|---|
Number of residues: | 29 |
Including | |
Standard Amino Acids: | 26 |
Non Standard Amino Acids: | 1 |
Water Molecules: | 2 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
1.053 | 1603.125 |
% Hydrophobic | % Polar |
---|---|
54.95 | 45.05 |
According to VolSite |
HET Code: | PZB |
---|---|
Formula: | C15H12N2O3 |
Molecular weight: | 268.267 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 61.23 % |
Polar Surface area: | 78.37 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 4 |
H-Bond Donors: | 3 |
Rings: | 3 |
Aromatic rings: | 3 |
Anionic atoms: | 0 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 3 |
X | Y | Z |
---|---|---|
-11.9284 | -17.4685 | -3.0661 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
OAB | OG1 | THR- 77 | 2.93 | 123.13 | H-Bond (Ligand Donor) |
CAP | CG1 | VAL- 78 | 3.6 | 0 | Hydrophobic |
CAD | CG1 | VAL- 82 | 4.24 | 0 | Hydrophobic |
CAC | CB | ASN- 85 | 3.42 | 0 | Hydrophobic |
CAK | CB | ALA- 167 | 3.24 | 0 | Hydrophobic |
CAO | CG1 | VAL- 228 | 3.97 | 0 | Hydrophobic |
CAF | CG2 | THR- 229 | 4.43 | 0 | Hydrophobic |
CAG | CB | THR- 229 | 3.87 | 0 | Hydrophobic |
CAG | CB | ALA- 233 | 3.97 | 0 | Hydrophobic |