sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 4bga | ADP | Predicted molecular chaperone distantly related to HSP70-fold metalloproteases |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 4bga | ADP | Predicted molecular chaperone distantly related to HSP70-fold metalloproteases | / | 1.000 | |
| 4mo4 | ACP | Anhydro-N-acetylmuramic acid kinase | / | 0.484 | |
| 5b0o | ADP | Flagellum-specific ATP synthase | 3.6.3.14 | 0.481 | |
| 3lm9 | ADP | Putative fructokinase | 2.7.1.4 | 0.470 | |
| 4j4n | D44 | Peptidylprolyl isomerase | / | 0.463 | |
| 2qs4 | LY5 | Glutamate receptor ionotropic, kainate 1 | / | 0.459 | |
| 3beg | ANP | SRSF protein kinase 1 | 2.7.11.1 | 0.449 | |
| 2bn4 | FMN | NADPH--cytochrome P450 reductase | / | 0.447 |