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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3mb9ZSTAldose reductase1.1.1.21

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
3mb9ZSTAldose reductase1.1.1.211.000
3lenZSTAldose reductase1.1.1.210.656
2dv0ZSTAldose reductase1.1.1.210.645
2hv5ZSTAldose reductase1.1.1.210.641
3m0iZSTAldose reductase1.1.1.210.640
2fz8ZSTAldose reductase1.1.1.210.635
2fz9ZSTAldose reductase1.1.1.210.632
1pwlBFIAldose reductase1.1.1.210.626
1z3n3NAAldose reductase1.1.1.210.624
2hvnZSTAldose reductase1.1.1.210.613
1ieiZESAldose reductase1.1.1.210.611
2pdxZSTAldose reductase1.1.1.210.610
3m4h388Aldose reductase1.1.1.210.610
3lboLDTAldose reductase1.1.1.210.608
2pdn47DAldose reductase1.1.1.210.607
3lqlLDTAldose reductase1.1.1.210.607
2pd5ZSTAldose reductase1.1.1.210.605
3mc5393Aldose reductase1.1.1.210.605
2i16LDTAldose reductase1.1.1.210.603
2hvoZSTAldose reductase1.1.1.210.602
1t40ID5Aldose reductase1.1.1.210.600
2pdbZSTAldose reductase1.1.1.210.596
2duxZSTAldose reductase1.1.1.210.591
2pdh47DAldose reductase1.1.1.210.589
4gca2X9Aldose reductase1.1.1.210.589
2pdg47DAldose reductase1.1.1.210.588
2pdmZSTAldose reductase1.1.1.210.588
2pdc393Aldose reductase1.1.1.210.585
3ghtLDTAldose reductase1.1.1.210.584
2ikj393Aldose reductase1.1.1.210.583
3ghsLDTAldose reductase1.1.1.210.583
1z8962PAldose reductase1.1.1.210.581
3ghuLDTAldose reductase1.1.1.210.579
2pdp393Aldose reductase1.1.1.210.578
3m64393Aldose reductase1.1.1.210.578
3ghrLDTAldose reductase1.1.1.210.577
1frbZSTAldose reductase-related protein 2/0.576
2iki388Aldose reductase1.1.1.210.575
3ld5LDTAldose reductase1.1.1.210.574
2i17LDTAldose reductase1.1.1.210.573
3g5eQ74Aldose reductase1.1.1.210.571
4yu153NAldose reductase1.1.1.210.570
2qxwLDTAldose reductase1.1.1.210.569
2pzn393Aldose reductase1.1.1.210.568
1us0LDTAldose reductase1.1.1.210.567
2pdiZSTAldose reductase1.1.1.210.560
1t41ID5Aldose reductase1.1.1.210.558
3t423T4Aldose reductase1.1.1.210.552
2duzZSTAldose reductase1.1.1.210.550
2pdj393Aldose reductase1.1.1.210.548
3lz5LDTAldose reductase1.1.1.210.547
2pdlTOLAldose reductase1.1.1.210.515
2pdfZSTAldose reductase1.1.1.210.513
2pdu393Aldose reductase1.1.1.210.513
2ikhLITAldose reductase1.1.1.210.507
2fzdTOLAldose reductase1.1.1.210.494
1ah3TOLAldose reductase1.1.1.210.490
1zuaTOLAldo-keto reductase family 1 member B101.1.10.489
2pdq47DAldose reductase1.1.1.210.485
3g493G4Corticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.476
2xupTZ5Acetylcholinesterase3.1.1.70.475
2nvcITAAldose reductase1.1.1.210.468
2psjCEIRenilla-luciferin 2-monooxygenase1.13.12.50.466
4ey7E20Acetylcholinesterase3.1.1.70.466
4jt81NRNAD-dependent protein deacetylase sirtuin-3, mitochondrial3.5.10.464
2xuiTZ5Acetylcholinesterase3.1.1.70.462
2aovC2MHistamine N-methyltransferase2.1.1.80.461
2inzOHPAldose reductase1.1.1.210.460
3f3y4OABile salt sulfotransferase2.8.2.140.457
5ctoNTD4-hydroxyphenylpyruvate dioxygenase1.13.11.270.456
2pdyFIDAldose reductase1.1.1.210.453
4jt91NSNAD-dependent protein deacetylase sirtuin-3, mitochondrial3.5.10.452
2xuqTZ4Acetylcholinesterase3.1.1.70.451
4jsr1NQNAD-dependent protein deacetylase sirtuin-3, mitochondrial3.5.10.450
1pj6FOLDimethylglycine oxidase1.5.3.100.449
2f3815MAldo-keto reductase family 1 member C3/0.449
2v0mKLNCytochrome P450 3A4/0.449
2xujTZ5Acetylcholinesterase3.1.1.70.449
3u2cSUZAldose reductase1.1.1.210.449
2agtFIDAldose reductase1.1.1.210.448
2xuhTZ4Acetylcholinesterase3.1.1.70.448
2xuoTZ4Acetylcholinesterase3.1.1.70.448
3g4kROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.448
4x3uSVRChromobox protein homolog 7/0.448
3jsxCC2NAD(P)H dehydrogenase [quinone] 11.6.5.20.447
5liu388Aldo-keto reductase family 1 member B101.1.10.447
1u65CP0Acetylcholinesterase3.1.1.70.446
4ga8SBIAldo-keto reductase family 1 member B101.1.10.446
2xufTZ4Acetylcholinesterase3.1.1.70.445
4bvnP32Beta-1 adrenergic receptor/0.445
4hcy0YNTransketolase/0.444
1oynROLcAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.443
3g4gD71cAMP-specific 3',5'-cyclic phosphodiesterase 4D3.1.4.530.443
3g72A6TRenin3.4.23.150.443
4l5b1UXDeoxycytidine kinase2.7.1.740.443
4lxjLANLanosterol 14-alpha demethylase1.14.13.700.443
1uhoVDNcGMP-specific 3',5'-cyclic phosphodiesterase/0.442
4m0f1YKAcetylcholinesterase3.1.1.70.442
1el3I84Aldose reductase1.1.1.210.441
2aouCQAHistamine N-methyltransferase2.1.1.80.441
3g70A5TRenin3.4.23.150.441
4kmzFOLFolate receptor beta/0.440