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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3lxeTORCarbonic anhydrase 14.2.1.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3lxeTORCarbonic anhydrase 14.2.1.11.000
3mdzEZLCarbonic anhydrase 74.2.1.10.515
1bn3AL6Carbonic anhydrase 24.2.1.10.494
1i9qIOFCarbonic anhydrase 24.2.1.10.489
1jd0AZMCarbonic anhydrase 124.2.1.10.486
5fl49FKCarbonic anhydrase 94.2.1.10.482
1bnnAL1Carbonic anhydrase 24.2.1.10.476
3saxE50Carbonic anhydrase 24.2.1.10.474
1i90INMCarbonic anhydrase 24.2.1.10.473
1i91INQCarbonic anhydrase 24.2.1.10.472
3oimVZ5Carbonic anhydrase 24.2.1.10.472
3qykIE2Carbonic anhydrase 24.2.1.10.472
3kigDA4Carbonic anhydrase 24.2.1.10.468
4klaCHDFerrochelatase, mitochondrial4.99.1.10.468
1if5FBTCarbonic anhydrase 24.2.1.10.463
1a42BZUCarbonic anhydrase 24.2.1.10.462
2h15B19Carbonic anhydrase 24.2.1.10.462
3dcsMZMCarbonic anhydrase 24.2.1.10.462
1g4jFFBCarbonic anhydrase 24.2.1.10.459
1h66FADNAD(P)H dehydrogenase [quinone] 11.6.5.20.458
1oklMNSCarbonic anhydrase 24.2.1.10.458
1i9nIOACarbonic anhydrase 24.2.1.10.457
1zsbAZMCarbonic anhydrase 24.2.1.10.457
2a59LMZ6,7-dimethyl-8-ribityllumazine synthase2.5.1.780.457
3eft3BSCarbonic anhydrase 24.2.1.10.457
1u1f183Uridine phosphorylase2.4.2.30.456
3betCTFCarbonic anhydrase 24.2.1.10.456
4k13ETSCarbonic anhydrase 24.2.1.10.456
1if7SBRCarbonic anhydrase 24.2.1.10.455
3hkuTORCarbonic anhydrase 24.2.1.10.455
1kboFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.454
2hrcCHDFerrochelatase, mitochondrial4.99.1.10.454
1gg5FADNAD(P)H dehydrogenase [quinone] 11.6.5.20.453
1if6FBUCarbonic anhydrase 24.2.1.10.453
4knnE1FCarbonic anhydrase 134.2.1.10.453
1d4aFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.452
1bntAL2Carbonic anhydrase 24.2.1.10.451
1bnvAL7Carbonic anhydrase 24.2.1.10.451
1g1dFSBCarbonic anhydrase 24.2.1.10.450
3q9bB3NAcetylpolyamine amidohydrolase/0.450
4f1l0RYPoly [ADP-ribose] polymerase 142.4.2.300.450
1bn1AL5Carbonic anhydrase 24.2.1.10.449
1ttm667Carbonic anhydrase 24.2.1.10.449
2rqfJH3Hemolymph juvenile hormone binding protein/0.449
3bi2FADPolyamine oxidase FMS1/0.449
3dazMZMCarbonic anhydrase 24.2.1.10.449
3h3qH13Collagen type IV alpha-3-binding protein/0.449
3m96E38Carbonic anhydrase 24.2.1.10.449
3zhrTPPMultifunctional 2-oxoglutarate metabolism enzyme1.2.4.20.449
4k0tD9ZCarbonic anhydrase 24.2.1.10.449
3dc3AZMCarbonic anhydrase 24.2.1.10.448
4bfwZVWPantothenate kinase2.7.1.330.448
1cilETSCarbonic anhydrase 24.2.1.10.447
1g45FSBCarbonic anhydrase 24.2.1.10.447
2x7uWZACarbonic anhydrase 24.2.1.10.447
3dcwEZLCarbonic anhydrase 24.2.1.10.447
5fd8A5APutative carboxypeptidase yocD/0.447
1g4oBSBCarbonic anhydrase 24.2.1.10.446
4ilx1EZCarbonic anhydrase 24.2.1.10.446
1bnwTPDCarbonic anhydrase 24.2.1.10.445
3dbuD8WCarbonic anhydrase 24.2.1.10.445
1siqFADGlutaryl-CoA dehydrogenase, mitochondrial1.3.8.60.444
1xpz4TZCarbonic anhydrase 24.2.1.10.444
3myqE27Carbonic anhydrase 24.2.1.10.444
1fx9MJIPhospholipase A2, major isoenzyme3.1.1.40.442
2xweAMFGlucosylceramidase3.2.1.450.442
3dd82C7Carbonic anhydrase 24.2.1.10.442
3n0nP9BCarbonic anhydrase 24.2.1.10.442
3oy0OY0Carbonic anhydrase 24.2.1.10.442
4hu1V13Carbonic anhydrase 134.2.1.10.442
3igpDT7Carbonic anhydrase 24.2.1.10.441
3k2fNKXCarbonic anhydrase 24.2.1.10.441
2lfoGCHFatty acid-binding protein, liver/0.440