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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3ladFADDihydrolipoyl dehydrogenase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3ladFADDihydrolipoyl dehydrogenase/1.000
1lpfFADDihydrolipoyl dehydrogenase1.8.1.40.607
2qaeFADDihydrolipoyl dehydrogenase1.8.1.40.567
2f5zFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.551
3urhFADDihydrolipoyl dehydrogenase/0.545
1zmcFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.531
4jq9FADDihydrolipoyl dehydrogenase/0.527
1jehFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.520
3rnmFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.520
1zx9FADMercuric reductase1.16.1.10.519
2yquFADDihydrolipoyl dehydrogenase/0.512
1zy8FADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.511
1zk7FADMercuric reductase1.16.1.10.509
2r9zFADGlutathione amide reductase/0.501
4jdrFADDihydrolipoyl dehydrogenase1.8.1.40.501
2eq9FADDihydrolipoyl dehydrogenase/0.498
2eq8FADDihydrolipoyl dehydrogenase/0.493
4m52FADDihydrolipoyl dehydrogenase1.8.1.40.490
1gerFADGlutathione reductase1.8.1.70.482
3ic9FADPutative dihydrolipoamide dehydrogenase/0.474
1bwcFADGlutathione reductase, mitochondrial1.8.1.70.469
1k4qFADGlutathione reductase, mitochondrial1.8.1.70.468
2a8xFADDihydrolipoyl dehydrogenase1.8.1.40.468
2cfyFADThioredoxin reductase 1, cytoplasmic1.8.1.90.462
3qfbFADThioredoxin reductase 1, cytoplasmic1.8.1.90.462
2j3nFADThioredoxin reductase 1, cytoplasmic1.8.1.90.461
1geuFADGlutathione reductase1.8.1.70.460
3grsFADGlutathione reductase, mitochondrial1.8.1.70.456
4kprFADThioredoxin reductase 1, cytoplasmic1.8.1.90.456
1grhFADGlutathione reductase, mitochondrial1.8.1.70.455
4gr1FADGlutathione reductase, mitochondrial1.8.1.70.455
1h6vFADThioredoxin reductase 1, cytoplasmic1.8.1.90.454
1grgFADGlutathione reductase, mitochondrial1.8.1.70.451
1greFADGlutathione reductase, mitochondrial1.8.1.70.447
3sqpFADGlutathione reductase, mitochondrial1.8.1.70.447
2eq7FADDihydrolipoyl dehydrogenase/0.444
1gsnFADGlutathione reductase, mitochondrial1.8.1.70.440
1lvlFADDihydrolipoyl dehydrogenase1.8.1.40.440