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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2eq9FADDihydrolipoyl dehydrogenase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2eq9FADDihydrolipoyl dehydrogenase/1.000
1zk7FADMercuric reductase1.16.1.10.585
2eq8FADDihydrolipoyl dehydrogenase/0.559
1zx9FADMercuric reductase1.16.1.10.543
4jq9FADDihydrolipoyl dehydrogenase/0.542
4jdrFADDihydrolipoyl dehydrogenase1.8.1.40.525
2f5zFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.519
2qaeFADDihydrolipoyl dehydrogenase1.8.1.40.516
1zy8FADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.515
3urhFADDihydrolipoyl dehydrogenase/0.507
2r9zFADGlutathione amide reductase/0.498
3ic9FADPutative dihydrolipoamide dehydrogenase/0.492
1zmcFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.491
2yquFADDihydrolipoyl dehydrogenase/0.488
1lpfFADDihydrolipoyl dehydrogenase1.8.1.40.487
2eq6FADDihydrolipoyl dehydrogenase/0.486
3rnmFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.475
1jehFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.470
3ladFADDihydrolipoyl dehydrogenase/0.466
1k4qFADGlutathione reductase, mitochondrial1.8.1.70.452
1lvlFADDihydrolipoyl dehydrogenase1.8.1.40.448
1gerFADGlutathione reductase1.8.1.70.443
2j3nFADThioredoxin reductase 1, cytoplasmic1.8.1.90.442
3sqpFADGlutathione reductase, mitochondrial1.8.1.70.440