scPDB - Distribution of Binding site Similarity values of 1maw entry / Site 4

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1maw	ATP	Tryptophan--tRNA ligase	6.1.1.2

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
1maw	ATP	Tryptophan--tRNA ligase	6.1.1.2	1.000
1wuu	ANP	Galactokinase	2.7.1.6	0.470
4z34	ON7	Lysophosphatidic acid receptor 1	/	0.464
4gt3	ATP	Mitogen-activated protein kinase 1	2.7.11.24	0.463
2zu9	GDP	Mannosyl-3-phosphoglycerate synthase	2.4.1.217	0.462
2fsv	NAD	NAD(P) transhydrogenase subunit alpha part 1	1.6.1.2	0.456
3o3p	GDD	Glycosyl transferase, family 2	/	0.455
1fwk	ADP	Homoserine kinase	2.7.1.39	0.453
1fm6	BRL	Peroxisome proliferator-activated receptor gamma	/	0.452
4xld	BRL	Peroxisome proliferator-activated receptor gamma	/	0.452
2ath	3EA	Peroxisome proliferator-activated receptor gamma	/	0.451
2cf6	NAP	Cinnamyl alcohol dehydrogenase 5	1.1.1.195	0.449
2f4b	EHA	Peroxisome proliferator-activated receptor gamma	/	0.448
4yt5	H4M	H(2)-forming methylenetetrahydromethanopterin dehydrogenase-related protein MJ1338	/	0.448
2ix5	FAD	Acyl-coenzyme A oxidase 4, peroxisomal	1.3.3.6	0.446
4rph	FAD	UDP-galactopyranose mutase	5.4.99.9	0.446
4i3z	ADP	Cyclin-dependent kinase 2	2.7.11.22	0.443
1i7i	AZ2	Peroxisome proliferator-activated receptor gamma	/	0.441
1iol	EST	Estradiol 17-beta-dehydrogenase 1	1.1.1.62	0.441
3flk	NAI	Tartrate dehydrogenase/decarboxylase	1.1.1.93	0.441
4m87	NAD	Enoyl-[acyl-carrier-protein] reductase [NADH]	/	0.441
1f8g	NAD	NAD(P) transhydrogenase subunit alpha part 1	1.6.1.2	0.440
2ejv	NAD	L-threonine 3-dehydrogenase	/	0.440
3zc3	NAP	Ferredoxin--NADP reductase	1.18.1.2	0.440
4qvt	ACO	Acetyltransferase YpeA	2.3.1	0.440