scPDB - Distribution of Binding site Similarity values of 1m9m entry / Site 1

Distribution of Binding site similarity measured by Shaper

You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1m9m	6NI	Nitric oxide synthase, endothelial	1.14.13.39

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
1m9m	6NI	Nitric oxide synthase, endothelial	1.14.13.39	1.000
2y37	A54	Nitric oxide synthase, inducible	1.14.13.39	0.612
1m8h	6NI	Nitric oxide synthase, inducible	1.14.13.39	0.609
3eah	327	Nitric oxide synthase, endothelial	1.14.13.39	0.604
1m9j	CLW	Nitric oxide synthase, endothelial	1.14.13.39	0.603
1m9k	7NI	Nitric oxide synthase, endothelial	1.14.13.39	0.592
1m9r	INE	Nitric oxide synthase, endothelial	1.14.13.39	0.590
3ufp	H4W	Nitric oxide synthase, brain	1.14.13.39	0.582
4jsf	QJ4	Nitric oxide synthase, brain	1.14.13.39	0.582
4jsi	Q05	Nitric oxide synthase, brain	1.14.13.39	0.577
1zzr	DP9	Nitric oxide synthase, brain	1.14.13.39	0.576
3nln	JRS	Nitric oxide synthase, brain	1.14.13.39	0.574
3b3o	JI3	Nitric oxide synthase, brain	1.14.13.39	0.566
3n61	XFJ	Nitric oxide synthase, brain	1.14.13.39	0.566
3png	8CX	Nitric oxide synthase, brain	1.14.13.39	0.566
3rqj	Y2B	Nitric oxide synthase, brain	1.14.13.39	0.566
3uft	HW7	Nitric oxide synthase, brain	1.14.13.39	0.566
3n62	XFJ	Nitric oxide synthase, brain	1.14.13.39	0.565
4jsj	QJ7	Nitric oxide synthase, brain	1.14.13.39	0.562
4lux	QJ8	Nitric oxide synthase, brain	1.14.13.39	0.562
1m9t	INE	Nitric oxide synthase, inducible	1.14.13.39	0.560
3ufs	HW6	Nitric oxide synthase, brain	1.14.13.39	0.560
4k5d	1Q6	Nitric oxide synthase, brain	1.14.13.39	0.560
3n5y	XFL	Nitric oxide synthase, brain	1.14.13.39	0.559
3pnf	8BX	Nitric oxide synthase, brain	1.14.13.39	0.558
3ufr	H5W	Nitric oxide synthase, brain	1.14.13.39	0.558
3rqm	X2E	Nitric oxide synthase, brain	1.14.13.39	0.557
3jx2	JI4	Nitric oxide synthase, brain	1.14.13.39	0.556
3n5z	XFM	Nitric oxide synthase, brain	1.14.13.39	0.556
4fw0	5KJ	Nitric oxide synthase, brain	1.14.13.39	0.556
4lwb	QJ8	Nitric oxide synthase oxygenase	1.14.13.165	0.556
4uga	Q05	Nitric oxide synthase oxygenase	1.14.13.165	0.556
3ufq	HW5	Nitric oxide synthase, brain	1.14.13.39	0.555
4imu	1ET	Nitric oxide synthase, brain	1.14.13.39	0.554
2hx4	4HX	Nitric oxide synthase, brain	1.14.13.39	0.553
3b3p	JI7	Nitric oxide synthase, brain	1.14.13.39	0.553
3nlq	JRR	Nitric oxide synthase, brain	1.14.13.39	0.553
4cx4	HW9	Nitric oxide synthase, brain	1.14.13.39	0.553
3ebf	332	Nitric oxide synthase, inducible	1.14.13.39	0.552
3n5v	XFH	Nitric oxide synthase, brain	1.14.13.39	0.551
3ufo	HW4	Nitric oxide synthase, brain	1.14.13.39	0.550
3jx4	J11	Nitric oxide synthase, brain	1.14.13.39	0.549
4jse	QJ2	Nitric oxide synthase, brain	1.14.13.39	0.548
1zzq	DP9	Nitric oxide synthase, brain	1.14.13.39	0.547
3nnz	59W	Nitric oxide synthase, brain	1.14.13.39	0.547
4cx3	HW8	Nitric oxide synthase, brain	1.14.13.39	0.547
4eux	HW1	Nitric oxide synthase, brain	1.14.13.39	0.547
4ug5	XFK	Nitric oxide synthase oxygenase	1.14.13.165	0.547
4k5g	Q13	Nitric oxide synthase, brain	1.14.13.39	0.546
1zzu	DP1	Nitric oxide synthase, brain	1.14.13.39	0.543
3n66	XFN	Nitric oxide synthase, brain	1.14.13.39	0.543
4ug9	1EW	Nitric oxide synthase oxygenase	1.14.13.165	0.543
3svq	JK4	Nitric oxide synthase, brain	1.14.13.39	0.542
4gqe	6KJ	Nitric oxide synthase, brain	1.14.13.39	0.542
3nlp	JSS	Nitric oxide synthase, brain	1.14.13.39	0.541
3eai	328	Nitric oxide synthase, inducible	1.14.13.39	0.539
3jx5	J14	Nitric oxide synthase, brain	1.14.13.39	0.539
4imt	1EW	Nitric oxide synthase, brain	1.14.13.39	0.537
3nlr	JRS	Nitric oxide synthase, brain	1.14.13.39	0.536
3nlv	3XA	Nitric oxide synthase, brain	1.14.13.39	0.536
3jwt	JI5	Nitric oxide synthase, brain	1.14.13.39	0.535
3nlw	3XF	Nitric oxide synthase, brain	1.14.13.39	0.535
4k5e	1Q7	Nitric oxide synthase, brain	1.14.13.39	0.535
4lwa	Q13	Nitric oxide synthase oxygenase	1.14.13.165	0.535
3ufu	HW8	Nitric oxide synthase, brain	1.14.13.39	0.534
4uqs	INE	Nitric oxide synthase oxygenase	1.14.13.165	0.534
3jx0	JI4	Nitric oxide synthase, brain	1.14.13.39	0.533
3e7t	B14	Nitric oxide synthase, inducible	1.14.13.39	0.532
3rql	X2D	Nitric oxide synthase, brain	1.14.13.39	0.531
3rqk	X2C	Nitric oxide synthase, brain	1.14.13.39	0.530
3tyl	AXW	Nitric oxide synthase, brain	1.14.13.39	0.530
3ufv	HW9	Nitric oxide synthase, brain	1.14.13.39	0.530
3ufw	HW0	Nitric oxide synthase, brain	1.14.13.39	0.529
3dqr	JI2	Nitric oxide synthase, brain	1.14.13.39	0.528
4jsh	Q15	Nitric oxide synthase, brain	1.14.13.39	0.528
3e7i	B2	Nitric oxide synthase, inducible	1.14.13.39	0.526
3svp	JK5	Nitric oxide synthase, brain	1.14.13.39	0.524
4imw	1EV	Nitric oxide synthase, brain	1.14.13.39	0.523
1r35	I58	Nitric oxide synthase, inducible	1.14.13.39	0.520
3n5x	XFK	Nitric oxide synthase, brain	1.14.13.39	0.520
4k5f	Q14	Nitric oxide synthase, brain	1.14.13.39	0.520
1qw5	14W	Nitric oxide synthase, inducible	1.14.13.39	0.519
3nlo	JSR	Nitric oxide synthase, brain	1.14.13.39	0.518
4ug7	1EV	Nitric oxide synthase oxygenase	1.14.13.165	0.517
3e68	AT6	Nitric oxide synthase, inducible	1.14.13.39	0.516
3e6o	A55	Nitric oxide synthase, inducible	1.14.13.39	0.516
4fvz	4KJ	Nitric oxide synthase, brain	1.14.13.39	0.515
3e7g	AT2	Nitric oxide synthase, inducible	1.14.13.39	0.514
3e7m	AT2	Nitric oxide synthase, inducible	1.14.13.39	0.514
3nny	59R	Nitric oxide synthase, brain	1.14.13.39	0.514
3n5w	XFJ	Nitric oxide synthase, brain	1.14.13.39	0.512
3nlj	JRR	Nitric oxide synthase, brain	1.14.13.39	0.512
3nly	3XC	Nitric oxide synthase, brain	1.14.13.39	0.512
3jwu	J11	Nitric oxide synthase, brain	1.14.13.39	0.510
1rs6	DP2	Nitric oxide synthase, brain	1.14.13.39	0.508
3nlk	JSS	Nitric oxide synthase, brain	1.14.13.39	0.508
3n60	XFN	Nitric oxide synthase, brain	1.14.13.39	0.506
4cx5	HW8	Nitric oxide synthase, brain	1.14.13.39	0.505
3e6t	1A2	Nitric oxide synthase, inducible	1.14.13.39	0.500
3nlz	3XD	Nitric oxide synthase, brain	1.14.13.39	0.490
3n65	XFJ	Nitric oxide synthase, brain	1.14.13.39	0.489