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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1gwjFMNMorphinone reductase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1gwjFMNMorphinone reductase/1.000
1sb8UD2WbpP/0.480
3rv9RVDSalicylate synthase/0.467
2z95NDPGDP-mannose 4,6-dehydratase/0.463
1qrtATPGlutamine--tRNA ligase6.1.1.180.462
4nauAGSPhosphopantetheine adenylyltransferase/0.461
1nuqNXXNicotinamide/nicotinic acid mononucleotide adenylyltransferase 3/0.459
3qw4U5POrotidine-5-phosphate decarboxylase/orotate phosphoribosyltransferase, putative/0.456
1sesAHXSerine--tRNA ligase6.1.1.110.454
3hf3FMNChromate reductase/0.453
5kgpACOPredicted acetyltransferase/0.453
3mzhCMPCRP-like cAMP-activated global transcriptional regulator/0.451
4f5dC2EStimulator of interferon genes protein/0.449
4c13UMLUDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L-lysine ligase/0.446
3ukfGDUUDP-galactopyranose mutase/0.445
4loi1YCStimulator of interferon genes protein/0.445
5dozNDPJamJ/0.445
5c3aURMHisto-blood group ABO system transferase/0.444
3ge6FMNNitroreductase/0.443
3junAKDPhenazine biosynthesis protein A/B/0.443
1lrjUD1UDP-glucose 4-epimerase5.1.3.20.441
2rl1UD1UDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.441
3t59FADSulfhydryl oxidase 11.8.3.20.441
2q3oFMN12-oxophytodienoate reductase 31.3.1.420.440