2.140 Å
X-ray
2011-05-06
Name: | Salicylate synthase |
---|---|
ID: | MBTI_MYCTU |
AC: | P9WFX1 |
Organism: | Mycobacterium tuberculosis |
Reign: | Bacteria |
TaxID: | 83332 |
EC Number: | / |
Chain Name: | Percentage of Residues within binding site |
---|---|
A | 100 % |
B-Factor: | 33.649 |
---|---|
Number of residues: | 27 |
Including | |
Standard Amino Acids: | 25 |
Non Standard Amino Acids: | 0 |
Water Molecules: | 2 |
Cofactors: | |
Metals: |
Ligandability | Volume (Å3) |
---|---|
0.678 | 1069.875 |
% Hydrophobic | % Polar |
---|---|
33.75 | 66.25 |
According to VolSite |
HET Code: | RVD |
---|---|
Formula: | C12H10O6 |
Molecular weight: | 250.204 g/mol |
DrugBank ID: | - |
Buried Surface Area: | 60.77 % |
Polar Surface area: | 109.72 Å2 |
Number of | |
---|---|
H-Bond Acceptors: | 6 |
H-Bond Donors: | 1 |
Rings: | 1 |
Aromatic rings: | 1 |
Anionic atoms: | 2 |
Cationic atoms: | 0 |
Rule of Five Violation: | 0 |
Rotatable Bonds: | 5 |
X | Y | Z |
---|---|---|
39.1468 | 0.958833 | 29.9556 |
Represent the protein/ligand binding mode, centered on the ligand
Dashed lines represents hydrogen bonds and metal interactions
Green residue labels for amino acids with hydrophobic contacts (green lines) to the ligand
Ligand | Protein | Interaction | |||
---|---|---|---|---|---|
Atom | Atom | Residue | Distance (Å) | Angle (°) | Type |
CAJ | CG2 | ILE- 207 | 4.33 | 0 | Hydrophobic |
CAA | CB | PRO- 251 | 3.65 | 0 | Hydrophobic |
CAA | CB | LEU- 268 | 3.91 | 0 | Hydrophobic |
CAK | CG2 | THR- 361 | 3.77 | 0 | Hydrophobic |
CAI | CG2 | THR- 361 | 3.66 | 0 | Hydrophobic |
OAE | OH | TYR- 385 | 2.73 | 175.95 | H-Bond (Protein Donor) |
CAJ | CD1 | LEU- 404 | 3.82 | 0 | Hydrophobic |
CAP | CD1 | LEU- 404 | 3.62 | 0 | Hydrophobic |
OAE | N | GLY- 419 | 2.68 | 151.33 | H-Bond (Protein Donor) |
OAB | NZ | LYS- 438 | 3.06 | 0 | Ionic (Protein Cationic) |
OAD | NZ | LYS- 438 | 3.92 | 0 | Ionic (Protein Cationic) |
DuAr | NZ | LYS- 438 | 3.34 | 6.66 | Pi/Cation |
CAP | CD | LYS- 438 | 3.45 | 0 | Hydrophobic |
OAC | O | HOH- 538 | 2.53 | 150.54 | H-Bond (Protein Donor) |