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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4fvz H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.948
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.923
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.919
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.911
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.909
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.907
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.907
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.907
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.907
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.907
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.907
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.906
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.906
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.906
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.906
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.905
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.905
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.904
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.904
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.904
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.904
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.903
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.902
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.901
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.900
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.899
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.898
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.894
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.893
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.893
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.893
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.892
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.892
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.892
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.891
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.890
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.890
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.890
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.890
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.890
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.889
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.889
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.888
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.888
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.887
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.887
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.887
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.886
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.886
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.885
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.885
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.883
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.882
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.882
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.880
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.879
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.879
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.878
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.877
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.874
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.872
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.870
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.869
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.869
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.868
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.866
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.866
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.865
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.865
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.864
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.863
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.862
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.862
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.861
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.861
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.860
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.859
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.858
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.857
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.853
3png H4BNitric oxide synthase, brain 1.14.13.39 0.853
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.851
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.850
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.842
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.841
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.838
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.834
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.829
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.825
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.824
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.821
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.817
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.817
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.815
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.801
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.799
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.798
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.788
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.773
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.741
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.732
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.720
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.716
3nw2 H4BNitric oxide synthase, inducible 1.14.13.39 0.704
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.703
1m8h H4BNitric oxide synthase, inducible 1.14.13.39 0.675
3e6t H4BNitric oxide synthase, inducible 1.14.13.39 0.673
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.661
4e5f 0N7Polymerase acidic protein / 0.660
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.657