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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4fvx H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.933
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.929
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.928
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.928
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.925
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.925
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.925
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.922
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.920
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.912
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.912
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.911
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.911
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.911
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.911
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.910
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.910
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.909
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.909
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.909
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.909
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.909
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.909
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.909
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.909
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.909
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.906
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.906
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.905
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.904
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.904
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.903
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.903
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.895
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.894
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.892
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.892
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.892
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.891
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.891
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.891
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.891
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.891
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.890
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.888
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.888
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.888
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.888
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.887
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.887
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.887
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.886
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.883
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.883
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.881
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.879
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.879
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.877
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.875
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.875
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.874
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.874
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.873
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.873
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.873
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.872
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.872
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.868
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.867
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.867
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.865
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.859
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.859
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.859
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.858
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.858
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.857
3png H4BNitric oxide synthase, brain 1.14.13.39 0.856
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.855
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.852
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.847
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.843
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.841
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.839
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.835
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.835
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.830
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.823
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.823
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.818
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.816
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.812
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.810
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.805
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.805
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.800
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.780
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.760
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.735
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.726
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.724
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.722
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.706
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.703
1r35 H4BNitric oxide synthase, inducible 1.14.13.39 0.675
3e6t H4BNitric oxide synthase, inducible 1.14.13.39 0.674
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.660
4e5f 0N7Polymerase acidic protein / 0.660
1m8h H4BNitric oxide synthase, inducible 1.14.13.39 0.656
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.655
1qom H4BNitric oxide synthase, inducible 1.14.13.39 0.653