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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3roc 29A Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3roc 29AMitogen-activated protein kinase 14 / 1.105
3hll I45Mitogen-activated protein kinase 14 / 0.992
3hp2 P36Mitogen-activated protein kinase 14 / 0.837
2qd9 LGFMitogen-activated protein kinase 14 / 0.789
3qud N3FMitogen-activated protein kinase 14 / 0.776
1ove 358Mitogen-activated protein kinase 14 / 0.756
1yw2 PGJMitogen-activated protein kinase 14 / 0.742
3fml FMLMitogen-activated protein kinase 14 / 0.723
1ouy 094Mitogen-activated protein kinase 14 / 0.722
3fi4 FI4Mitogen-activated protein kinase 14 / 0.703
3iw7 IPKMitogen-activated protein kinase 14 / 0.696
3iw5 DF3Mitogen-activated protein kinase 14 / 0.690
1zzl TZYMitogen-activated protein kinase 14 / 0.685
3zsi 52PMitogen-activated protein kinase 14 / 0.684
1ywr LI9Mitogen-activated protein kinase 14 / 0.682
3fls FLSMitogen-activated protein kinase 14 / 0.672
3que 3FFMitogen-activated protein kinase 14 / 0.669
3iw6 PP0Mitogen-activated protein kinase 14 / 0.664
1bl6 SB6Mitogen-activated protein kinase 14 / 0.663
1efz PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.660
1m3q ANGN-glycosylase/DNA lyase 3.2.2 0.660
1v2h GUNPurine nucleoside phosphorylase 2.4.2.1 0.660
3fly FLYMitogen-activated protein kinase 14 / 0.660
3nww 3NWMitogen-activated protein kinase 14 / 0.660
4e5l DBHPolymerase acidic protein / 0.660
4ek9 EP4Histone-lysine N-methyltransferase, H3 lysine-79 specific 2.1.1.43 0.660
4loo SB4Mitogen-activated protein kinase 14 / 0.657
3fmn 530Mitogen-activated protein kinase 14 / 0.654
3jy0 LYGSerine/threonine-protein kinase pim-1 2.7.11.1 0.652
2o0u C0MMitogen-activated protein kinase 10 2.7.11.24 0.650
3tgu WF3Cytochrome b / 0.650