Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3n63 XFN Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3n63 XFNNitric oxide synthase, brain 1.14.13.39 0.898
3n66 XFNNitric oxide synthase, brain 1.14.13.39 0.874
3n60 XFNNitric oxide synthase, brain 1.14.13.39 0.838
4jse QJ2Nitric oxide synthase, brain 1.14.13.39 0.739
3jwu J11Nitric oxide synthase, brain 1.14.13.39 0.736
3jx0 JI4Nitric oxide synthase, brain 1.14.13.39 0.732
3n61 XFJNitric oxide synthase, brain 1.14.13.39 0.731
3nlw 3XFNitric oxide synthase, brain 1.14.13.39 0.730
3ufp H4WNitric oxide synthase, brain 1.14.13.39 0.727
4imw 1EVNitric oxide synthase, brain 1.14.13.39 0.723
4ug5 XFKNitric oxide synthase oxygenase 1.14.13.165 0.721
3jx5 J14Nitric oxide synthase, brain 1.14.13.39 0.720
3n5x XFKNitric oxide synthase, brain 1.14.13.39 0.720
3n62 XFJNitric oxide synthase, brain 1.14.13.39 0.720
4imu 1ETNitric oxide synthase, brain 1.14.13.39 0.719
4k5d 1Q6Nitric oxide synthase, brain 1.14.13.39 0.718
4jsf QJ4Nitric oxide synthase, brain 1.14.13.39 0.717
3ufq HW5Nitric oxide synthase, brain 1.14.13.39 0.715
3ufr H5WNitric oxide synthase, brain 1.14.13.39 0.715
4jsj QJ7Nitric oxide synthase, brain 1.14.13.39 0.715
4k5f Q14Nitric oxide synthase, brain 1.14.13.39 0.714
3ufo HW4Nitric oxide synthase, brain 1.14.13.39 0.713
3nlk JSSNitric oxide synthase, brain 1.14.13.39 0.711
4jsh Q15Nitric oxide synthase, brain 1.14.13.39 0.711
4ug9 1EWNitric oxide synthase oxygenase 1.14.13.165 0.711
3nlo JSRNitric oxide synthase, brain 1.14.13.39 0.707
4k5e 1Q7Nitric oxide synthase, brain 1.14.13.39 0.706
3n5w XFJNitric oxide synthase, brain 1.14.13.39 0.705
3tyl AXWNitric oxide synthase, brain 1.14.13.39 0.704
4ug7 1EVNitric oxide synthase oxygenase 1.14.13.165 0.704
3jx4 J11Nitric oxide synthase, brain 1.14.13.39 0.702
4jsg Q10Nitric oxide synthase, brain 1.14.13.39 0.702
3jx2 JI4Nitric oxide synthase, brain 1.14.13.39 0.699
3tym 08RNitric oxide synthase, brain 1.14.13.39 0.697
3e68 AT6Nitric oxide synthase, inducible 1.14.13.39 0.695
4k5g Q13Nitric oxide synthase, brain 1.14.13.39 0.695
4lux QJ8Nitric oxide synthase, brain 1.14.13.39 0.694
4uga Q05Nitric oxide synthase oxygenase 1.14.13.165 0.694
4eux HW1Nitric oxide synthase, brain 1.14.13.39 0.692
3b3o JI3Nitric oxide synthase, brain 1.14.13.39 0.691
3n5v XFHNitric oxide synthase, brain 1.14.13.39 0.691
3n5z XFMNitric oxide synthase, brain 1.14.13.39 0.684
3nnz 59WNitric oxide synthase, brain 1.14.13.39 0.672
4lwa Q13Nitric oxide synthase oxygenase 1.14.13.165 0.671
4lwb QJ8Nitric oxide synthase oxygenase 1.14.13.165 0.668
1qw5 14WNitric oxide synthase, inducible 1.14.13.39 0.666
4jsi Q05Nitric oxide synthase, brain 1.14.13.39 0.656