Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3n62 XFJ Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3n62 XFJNitric oxide synthase, brain 1.14.13.39 1.028
3n65 XFJNitric oxide synthase, brain 1.14.13.39 0.946
3n5w XFJNitric oxide synthase, brain 1.14.13.39 0.931
3n5x XFKNitric oxide synthase, brain 1.14.13.39 0.877
3n61 XFJNitric oxide synthase, brain 1.14.13.39 0.875
4imt 1EWNitric oxide synthase, brain 1.14.13.39 0.868
4k5g Q13Nitric oxide synthase, brain 1.14.13.39 0.857
3nlr JRSNitric oxide synthase, brain 1.14.13.39 0.819
4jsf QJ4Nitric oxide synthase, brain 1.14.13.39 0.813
4imw 1EVNitric oxide synthase, brain 1.14.13.39 0.798
3nlp JSSNitric oxide synthase, brain 1.14.13.39 0.788
3jws JI4Nitric oxide synthase, brain 1.14.13.39 0.785
4lux QJ8Nitric oxide synthase, brain 1.14.13.39 0.785
3nlw 3XFNitric oxide synthase, brain 1.14.13.39 0.781
4eux HW1Nitric oxide synthase, brain 1.14.13.39 0.779
4imu 1ETNitric oxide synthase, brain 1.14.13.39 0.779
3b3p JI7Nitric oxide synthase, brain 1.14.13.39 0.777
4jsi Q05Nitric oxide synthase, brain 1.14.13.39 0.774
3jx0 JI4Nitric oxide synthase, brain 1.14.13.39 0.765
3ufq HW5Nitric oxide synthase, brain 1.14.13.39 0.764
3jwu J11Nitric oxide synthase, brain 1.14.13.39 0.755
3jx5 J14Nitric oxide synthase, brain 1.14.13.39 0.755
3nlk JSSNitric oxide synthase, brain 1.14.13.39 0.751
3b3o JI3Nitric oxide synthase, brain 1.14.13.39 0.750
4jsg Q10Nitric oxide synthase, brain 1.14.13.39 0.748
3jx4 J11Nitric oxide synthase, brain 1.14.13.39 0.745
3tym 08RNitric oxide synthase, brain 1.14.13.39 0.745
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
3ufr H5WNitric oxide synthase, brain 1.14.13.39 0.744
4ug5 XFKNitric oxide synthase oxygenase 1.14.13.165 0.744
3ufp H4WNitric oxide synthase, brain 1.14.13.39 0.743
3nlv 3XANitric oxide synthase, brain 1.14.13.39 0.741
4jsj QJ7Nitric oxide synthase, brain 1.14.13.39 0.741
4k5e 1Q7Nitric oxide synthase, brain 1.14.13.39 0.738
3tyl AXWNitric oxide synthase, brain 1.14.13.39 0.736
4ug7 1EVNitric oxide synthase oxygenase 1.14.13.165 0.729
3nln JRSNitric oxide synthase, brain 1.14.13.39 0.727
4k5d 1Q6Nitric oxide synthase, brain 1.14.13.39 0.724
3n5v XFHNitric oxide synthase, brain 1.14.13.39 0.723
4cx5 HW8Nitric oxide synthase, brain 1.14.13.39 0.721
3n63 XFNNitric oxide synthase, brain 1.14.13.39 0.720
4ug9 1EWNitric oxide synthase oxygenase 1.14.13.165 0.720
3nlo JSRNitric oxide synthase, brain 1.14.13.39 0.714
3rql X2DNitric oxide synthase, brain 1.14.13.39 0.714
4jsh Q15Nitric oxide synthase, brain 1.14.13.39 0.711
3e68 AT6Nitric oxide synthase, inducible 1.14.13.39 0.709
3rqm X2ENitric oxide synthase, brain 1.14.13.39 0.704
3ufo HW4Nitric oxide synthase, brain 1.14.13.39 0.704
3n5z XFMNitric oxide synthase, brain 1.14.13.39 0.701
4cx4 HW9Nitric oxide synthase, brain 1.14.13.39 0.701
4k5f Q14Nitric oxide synthase, brain 1.14.13.39 0.699
3n66 XFNNitric oxide synthase, brain 1.14.13.39 0.693
3n5y XFLNitric oxide synthase, brain 1.14.13.39 0.688
3ufw HW0Nitric oxide synthase, brain 1.14.13.39 0.688
4uga Q05Nitric oxide synthase oxygenase 1.14.13.165 0.684
3jx6 JI5Nitric oxide synthase, brain 1.14.13.39 0.683
3dqr JI2Nitric oxide synthase, brain 1.14.13.39 0.680
3jwt JI5Nitric oxide synthase, brain 1.14.13.39 0.680
3pnf 8BXNitric oxide synthase, brain 1.14.13.39 0.680
3ufu HW8Nitric oxide synthase, brain 1.14.13.39 0.680
4lwa Q13Nitric oxide synthase oxygenase 1.14.13.165 0.676
3ufv HW9Nitric oxide synthase, brain 1.14.13.39 0.675
3nlq JRRNitric oxide synthase, brain 1.14.13.39 0.674
3nnz 59WNitric oxide synthase, brain 1.14.13.39 0.672
3jx2 JI4Nitric oxide synthase, brain 1.14.13.39 0.670
3png 8CXNitric oxide synthase, brain 1.14.13.39 0.668
3rqj Y2BNitric oxide synthase, brain 1.14.13.39 0.665