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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3lz5 LDT Aldose reductase 1.1.1.21

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3lz5 LDTAldose reductase 1.1.1.21 1.126
3ld5 LDTAldose reductase 1.1.1.21 1.101
2qxw LDTAldose reductase 1.1.1.21 1.081
3lql LDTAldose reductase 1.1.1.21 1.080
3ghs LDTAldose reductase 1.1.1.21 1.062
3ghr LDTAldose reductase 1.1.1.21 1.061
2i17 LDTAldose reductase 1.1.1.21 1.043
3lbo LDTAldose reductase 1.1.1.21 1.043
1us0 LDTAldose reductase 1.1.1.21 1.042
2i16 LDTAldose reductase 1.1.1.21 1.042
3ght LDTAldose reductase 1.1.1.21 1.032
3ghu LDTAldose reductase 1.1.1.21 1.031
3m4h 388Aldose reductase 1.1.1.21 0.962
2iki 388Aldose reductase 1.1.1.21 0.958
3m64 393Aldose reductase 1.1.1.21 0.872
2ikj 393Aldose reductase 1.1.1.21 0.838
3t42 3T4Aldose reductase 1.1.1.21 0.814
2pdp 393Aldose reductase 1.1.1.21 0.802
3mc5 393Aldose reductase 1.1.1.21 0.797
1iei ZESAldose reductase 1.1.1.21 0.796
2pdj 393Aldose reductase 1.1.1.21 0.789
2pdu 393Aldose reductase 1.1.1.21 0.780
2pzn 393Aldose reductase 1.1.1.21 0.775
2pdc 393Aldose reductase 1.1.1.21 0.757
2pdx ZSTAldose reductase 1.1.1.21 0.719
3g5e Q74Aldose reductase 1.1.1.21 0.713
2pdh 47DAldose reductase 1.1.1.21 0.712
2pdm ZSTAldose reductase 1.1.1.21 0.711
2dv0 ZSTAldose reductase 1.1.1.21 0.706
2fz9 ZSTAldose reductase 1.1.1.21 0.698
3mb9 ZSTAldose reductase 1.1.1.21 0.685
2hv5 ZSTAldose reductase 1.1.1.21 0.683
2duz ZSTAldose reductase 1.1.1.21 0.680
2hvn ZSTAldose reductase 1.1.1.21 0.679
1z89 62PAldose reductase 1.1.1.21 0.677
2pdn 47DAldose reductase 1.1.1.21 0.677
2pdi ZSTAldose reductase 1.1.1.21 0.673
3m0i ZSTAldose reductase 1.1.1.21 0.671
2pdb ZSTAldose reductase 1.1.1.21 0.670
2iqd LPAAldose reductase 1.1.1.21 0.669
4yu1 53NAldose reductase 1.1.1.21 0.664
2pdq 47DAldose reductase 1.1.1.21 0.663
3s3g TLTAldose reductase 1.1.1.21 0.663
2fz8 ZSTAldose reductase 1.1.1.21 0.661
2pdg 47DAldose reductase 1.1.1.21 0.658
2pdl TOLAldose reductase 1.1.1.21 0.655
2nvc ITAAldose reductase 1.1.1.21 0.654