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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3lt2 FT3 Enoyl-ACP reductase

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3lt2 FT3Enoyl-ACP reductase / 1.057
1nhg TCLEnoyl-ACP reductase / 0.969
3lt1 FT2Enoyl-ACP reductase / 0.932
3am3 TCLEnoyl-ACP reductase / 0.925
3am5 TCLEnoyl-ACP reductase / 0.915
2o2y TCLEnoyl-ACP reductase / 0.898
1uh5 TCLEnoyl-ACP reductase / 0.895
3lt0 FT1Enoyl-ACP reductase / 0.875
3am4 FT1Enoyl-ACP reductase / 0.860
2ol4 JPNEnoyl-ACP reductase / 0.853
3f4b TCLEnoyl-acyl carrier protein reductase / 0.823
1zw1 TN5Enoyl-ACP reductase / 0.803
3lsy FT0Enoyl-ACP reductase / 0.750
2o2s TCLEnoyl-acyl carrier reductase / 0.748
1nhw TCCEnoyl-ACP reductase / 0.733
1nnu TCTEnoyl-ACP reductase / 0.727
1zxl JP1Enoyl-ACP reductase / 0.692
3nrc TCLEnoyl-[acyl-carrier-protein] reductase [NADH] / 0.655
4e5l DBHPolymerase acidic protein / 0.654
1zsn TN2Enoyl-ACP reductase / 0.653