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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3l0h GTX Glutathione S-transferase A1 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3l0h GTXGlutathione S-transferase A1 2.5.1.18 1.292
2r6k GTXGlutathione S-transferase A1 2.5.1.18 1.048
3ktl GTXGlutathione S-transferase A1 2.5.1.18 0.984
1k3l GTXGlutathione S-transferase A1 2.5.1.18 0.980
2r3x GTXGlutathione S-transferase A1 2.5.1.18 0.944
1pl1 ABYGlutathione S-transferase A1 2.5.1.18 0.940
1k3y GTXGlutathione S-transferase A1 2.5.1.18 0.935
1pl2 ABYGlutathione S-transferase A1 2.5.1.18 0.896
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 0.860
1vf2 GTXGlutathione S-transferase 3 2.5.1.18 0.857
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.855
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.829
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.824
1f3b GBXGlutathione S-transferase A1 2.5.1.18 0.818
1guh GSBGlutathione S-transferase A1 2.5.1.18 0.815
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.808
2pgt GPRGlutathione S-transferase P 2.5.1.18 0.799
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.797
4hj2 LZ6Glutathione S-transferase A1 2.5.1.18 0.755
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.754
3ik7 BOBGlutathione S-transferase A4 2.5.1.18 0.734
1gti GTBGlutathione S-transferase P 1 2.5.1.18 0.729
1aqx GTDGlutathione S-transferase P 2.5.1.18 0.723
1pgt GTXGlutathione S-transferase P 2.5.1.18 0.722
3fyg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.715
3ik9 BOBGlutathione S-transferase A1 2.5.1.18 0.713
2glr GTXGlutathione S-transferase P 1 2.5.1.18 0.705
2j9h GTXGlutathione S-transferase P 2.5.1.18 0.697
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.691
2imk GTXAGAP009194-PA / 0.680
2aaw GTXGlutathione S-transferase 2.5.1.18 0.678
1gwc GTXGlutathione S-transferase 1 / 0.677
3gst GPRGlutathione S-transferase Mu 1 2.5.1.18 0.675
4gst GTDGlutathione S-transferase Mu 1 2.5.1.18 0.675
1q4j GTXGlutathione S-transferase 2.5.1.18 0.670
6gsw GPSGlutathione S-transferase Mu 1 2.5.1.18 0.670
1hnc GDNGlutathione S-transferase Mu 2 2.5.1.18 0.665
1m9a GTXGlutathione S-transferase class-mu 26 kDa isozyme 2.5.1.18 0.659
2c3q GTXGlutathione S-transferase theta-1 2.5.1.18 0.657
5agy GTBTau class glutathione S-transferase / 0.657
1bx9 GLY_GGL_FOEGlutathione S-transferase F2 2.5.1.18 0.656
5fwg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.654
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.650