Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3k3k A8S Abscisic acid receptor PYR1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3k3k A8SAbscisic acid receptor PYR1 / 0.955
3k90 A8SAbscisic acid receptor PYR1 / 0.891
3w9r A8SAbscisic acid receptor PYL9 / 0.790
3kdj A8SAbscisic acid receptor PYL1 / 0.782
4oic A8SBet v I allergen-like / 0.779
3zvu A8SAbscisic acid receptor PYR1 / 0.763
3oqu A8SAbscisic acid receptor PYL9 / 0.761
3kdi A8SAbscisic acid receptor PYL2 / 0.744
3kb3 A8SAbscisic acid receptor PYL2 / 0.731
3r6p A8SAbscisic acid receptor PYL10 / 0.708
3ujl A8SAbscisic acid receptor PYL2 / 0.708
4ds8 A8SAbscisic acid receptor PYL3 / 0.702
3kb0 A8SAbscisic acid receptor PYL2 / 0.697
4dsc A8SAbscisic acid receptor PYL3 / 0.673
2vd7 PD2Lysine-specific demethylase 4A 1.14.11 0.664
1m3q ANGN-glycosylase/DNA lyase 3.2.2 0.660
2puc GUNHTH-type transcriptional repressor PurR / 0.660
4e5l DBHPolymerase acidic protein / 0.660