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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3jwt H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.918
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.912
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.912
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.912
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.912
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.912
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.912
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.911
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.911
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.911
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.911
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.911
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.910
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.910
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.910
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.910
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.910
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.909
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.909
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.909
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.909
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.908
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.908
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.907
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.907
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.907
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.907
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.906
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.906
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.906
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.904
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.904
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.903
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.902
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.894
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.893
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.892
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.892
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.891
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.891
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.891
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.891
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.891
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.891
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.890
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.890
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.890
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.890
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.890
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.890
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.889
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.889
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.889
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.888
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.888
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.887
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.885
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.885
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.885
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.885
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.883
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.881
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.876
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.876
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.875
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.875
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.874
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.874
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.873
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.872
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.872
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.867
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.867
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.863
3png H4BNitric oxide synthase, brain 1.14.13.39 0.862
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.858
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.854
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.853
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.850
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.849
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.847
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.845
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.839
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.825
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.821
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.820
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.809
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.799
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.790
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.777
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.772
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.761
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.727
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.719
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.715
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.714
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.709
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.704
1r35 H4BNitric oxide synthase, inducible 1.14.13.39 0.681
3e7g H4BNitric oxide synthase, inducible 1.14.13.39 0.674
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.669
3ej8 H4BNitric oxide synthase, inducible 1.14.13.39 0.668
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.661
4e5f 0N7Polymerase acidic protein / 0.660
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.656