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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3jt7 H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.948
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.938
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.938
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.935
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.925
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.924
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.921
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.919
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.916
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.912
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.911
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.910
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.909
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.909
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.909
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.909
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.909
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.908
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.908
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.908
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.908
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.908
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.908
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.907
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.907
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.907
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.907
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.907
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.907
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.906
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.906
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.906
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.905
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.904
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.902
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.901
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.901
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.901
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.900
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.900
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.899
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.898
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.896
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.892
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.892
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.891
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.890
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.889
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.888
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.888
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.888
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.887
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.886
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.886
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.885
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.884
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.883
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.883
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.879
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.878
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.877
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.876
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.875
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.875
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.875
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.873
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.872
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.870
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.870
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.868
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.867
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.867
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.864
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.864
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.862
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.857
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.856
3png H4BNitric oxide synthase, brain 1.14.13.39 0.854
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.854
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.850
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.847
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.846
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.845
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.845
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.842
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.842
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.839
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.836
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.835
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.834
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.832
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.832
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.830
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.826
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.818
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.813
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.804
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.800
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.794
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.775
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.761
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.753
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.739
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.725
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.723
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.719
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.717
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.705
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.674
3e7g H4BNitric oxide synthase, inducible 1.14.13.39 0.673
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.669
4e5f 0N7Polymerase acidic protein / 0.660
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.656