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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3iw5 DF3 Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3iw5 DF3Mitogen-activated protein kinase 14 / 1.311
3fkn FKNMitogen-activated protein kinase 14 / 0.707
4dlj 6RGMitogen-activated protein kinase 14 / 0.692
3roc 29AMitogen-activated protein kinase 14 / 0.690
2ghl LIBMitogen-activated protein kinase 14 / 0.682
2gtm LIDMitogen-activated protein kinase 14 / 0.680
3fmm XI2Mitogen-activated protein kinase 14 / 0.665
2ghm LICMitogen-activated protein kinase 14 / 0.662
1efz PRFQueuine tRNA-ribosyltransferase 2.4.2.29 0.660
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.660
1m3q ANGN-glycosylase/DNA lyase 3.2.2 0.660
1v2h GUNPurine nucleoside phosphorylase 2.4.2.1 0.660
2puc GUNHTH-type transcriptional repressor PurR / 0.660
4e5i 0N9Polymerase acidic protein / 0.660
4e5l DBHPolymerase acidic protein / 0.660
3zsh 469Mitogen-activated protein kinase 14 / 0.659
3dko IHZEphrin type-A receptor 7 2.7.10.1 0.657
1exv 700Glycogen phosphorylase, liver form 2.4.1.1 0.655
2o0u C0MMitogen-activated protein kinase 10 2.7.11.24 0.654