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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3fc5 H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.918
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.885
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.884
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.883
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.882
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.882
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.881
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.881
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.878
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.877
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.877
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.875
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.875
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.871
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.870
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.869
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.868
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.867
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.867
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.867
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.867
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.866
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.866
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.866
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.866
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.866
3png H4BNitric oxide synthase, brain 1.14.13.39 0.866
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.866
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.866
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.866
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.865
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.865
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.865
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.865
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.865
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.865
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.864
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.864
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.863
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.863
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.862
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.862
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.861
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.861
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.859
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.854
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.854
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.854
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.853
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.852
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.852
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.852
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.852
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.850
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.850
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.850
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.849
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.849
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.848
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.848
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.848
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.847
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.846
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.846
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.845
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.844
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.841
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.840
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.835
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.835
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.835
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.834
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.834
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.833
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.831
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.831
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.830
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.830
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.830
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.829
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.828
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.828
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.823
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.820
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.818
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.817
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.815
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.814
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.814
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.813
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.811
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.811
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.811
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.810
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.808
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.807
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.806
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.804
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.798
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.787
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.787
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.753
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.739
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.736
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.715
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.715
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.703
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.692
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.692
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.691
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.675
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.673
3e7g H4BNitric oxide synthase, inducible 1.14.13.39 0.669
4e5f 0N7Polymerase acidic protein / 0.660
4uga H4BNitric oxide synthase oxygenase 1.14.13.165 0.658