Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3eml ZMA Adenosine receptor A2a

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3eml ZMAAdenosine receptor A2a / 0.857
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
5jtb ZMAAdenosine receptor A2a / 0.734
4eiy ZMAAdenosine receptor A2a / 0.716
5k2d ZMAAdenosine receptor A2a / 0.711
5k2b ZMAAdenosine receptor A2a / 0.702
5iu8 6DZAdenosine receptor A2a / 0.691
5iu4 ZMAAdenosine receptor A2a / 0.682
5uvi ZMAAdenosine receptor A2a / 0.666
5k2a ZMAAdenosine receptor A2a / 0.665
5k2c ZMAAdenosine receptor A2a / 0.664