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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3ea4 FAB Acetolactate synthase, chloroplastic 2.2.1.6

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3ea4 FABAcetolactate synthase, chloroplastic 2.2.1.6 1.475
3e9y FABAcetolactate synthase, chloroplastic 2.2.1.6 1.373
5ahk FADAcetolactate synthase II, large subunit / 1.103
2pan FADGlyoxylate carboligase 4.1.1.47 0.912
1jsc FADAcetolactate synthase catalytic subunit, mitochondrial 2.2.1.6 0.851
4d5g FADCyclohexane-1,2-dione hydrolase 3.7.1.11 0.820
1efv FADElectron transfer flavoprotein subunit alpha, mitochondrial / 0.794
1pox FADPyruvate oxidase 1.2.3.3 0.786
1pow FADPyruvate oxidase 1.2.3.3 0.764
1v5e FADPyruvate oxidase / 0.733
2dji FADPyruvate oxidase / 0.729
4iv8 SAMPhosphoethanolamine N-methyltransferase,putative / 0.723
1efp FADElectron transfer flavoprotein subunit alpha / 0.717
2ji9 ADPOxalyl-CoA decarboxylase 4.1.1.8 0.715
2o06 MTASpermidine synthase 2.5.1.16 0.713
2a1u FADElectron transfer flavoprotein subunit alpha, mitochondrial / 0.709
3u81 SAHCatechol O-methyltransferase 2.1.1.6 0.708
4pyn SAHCatechol O-methyltransferase 2.1.1.6 0.708
1y9d FADPyruvate oxidase 1.2.3.3 0.698
4pyo SAHCatechol O-methyltransferase 2.1.1.6 0.694
1x0p FADTll0078 protein / 0.690
4hj3 FMNLOV protein / 0.688
4mwz SAMPhosphoethanolamine N-methyltransferase, putative / 0.686
1wy7 SAHUncharacterized protein / 0.680
4o29 SAHProtein-L-isoaspartate O-methyltransferase / 0.678
2hmv ADPKtr system potassium uptake protein A / 0.674
4hj4 FMNLOV protein / 0.674
3cls FADElectron transfer flavoprotein subunit alpha / 0.673
4gf5 SAHCalS11 / 0.673
2ji7 ADPOxalyl-CoA decarboxylase 4.1.1.8 0.671
4hia FMNLOV protein / 0.671
3haz FADBifunctional protein PutA / 0.667
2p35 SAHTrans-aconitate 2-methyltransferase / 0.662
4tm3 FADKtzI / 0.659
3oe4 610Catechol O-methyltransferase 2.1.1.6 0.656
5jdz SAHMethyl transferase / 0.656
2ji6 ADPOxalyl-CoA decarboxylase 4.1.1.8 0.655
1p1h NADInositol-3-phosphate synthase 5.5.1.4 0.654
2yxl SFG450aa long hypothetical fmu protein / 0.654
1yrx FMNAppA protein / 0.653
1dnp FADDeoxyribodipyrimidine photo-lyase 4.1.99.3 0.652
1o97 FADElectron transfer flavoprotein subunit alpha / 0.652
2ih2 NEAModification methylase TaqI 2.1.1.72 0.652
2isj FMN5,6-dimethylbenzimidazole synthase 1.13.11.79 0.652
4bvh AR6NAD-dependent protein deacetylase sirtuin-3, mitochondrial 3.5.1 0.652
1s7g APRNAD-dependent protein deacylase 2 / 0.651
1uay ADNOxidoreductase / 0.650
2h59 APRNAD-dependent protein deacetylase / 0.650