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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3e6o H4B Nitric oxide synthase, inducible 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.785
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.753
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.739
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.736
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.733
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.729
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.726
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.725
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.725
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.722
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.722
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.722
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.722
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.722
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.721
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.721
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.721
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.720
3png H4BNitric oxide synthase, brain 1.14.13.39 0.720
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.719
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.716
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.713
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.711
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.711
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.710
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.709
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.709
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.709
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.709
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.708
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.707
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.707
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.707
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.707
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.707
1m8i H4BNitric oxide synthase, inducible 1.14.13.39 0.706
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.706
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.705
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.705
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.705
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.705
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.704
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.704
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.704
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.704
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.704
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.704
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.704
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.704
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.703
3e67 H4BNitric oxide synthase, inducible 1.14.13.39 0.703
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.703
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.703
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.703
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.703
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.703
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.702
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.702
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.702
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.702
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.702
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.701
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.701
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.701
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.701
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.700
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.700
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.700
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.700
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.699
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.699
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.699
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.699
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.699
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.698
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.698
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.698
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.698
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.698
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.698
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.698
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.698
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.698
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.697
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.696
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.695
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.695
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.695
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.695
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.695
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.694
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.694
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.694
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.694
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.694
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.693
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.690
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.688
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.684
1m8d H4BNitric oxide synthase, inducible 1.14.13.39 0.683
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.683
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.683
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.682
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.679
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.676
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.675
3e6t H4BNitric oxide synthase, inducible 1.14.13.39 0.673
3w6h AZMCarbonic anhydrase 1 4.2.1.1 0.673
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.672
4uga H4BNitric oxide synthase oxygenase 1.14.13.165 0.668
3nw2 H4BNitric oxide synthase, inducible 1.14.13.39 0.666
3nod H4BNitric oxide synthase, inducible 1.14.13.39 0.664
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.662
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.662
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.661
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.661
4e5f 0N7Polymerase acidic protein / 0.660
4blt APCNTPase P4 / 0.656
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.655
1m9t H4BNitric oxide synthase, inducible 1.14.13.39 0.650