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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2xy9 3ES Angiotensin-converting enzyme 3.2.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2xy9 3ESAngiotensin-converting enzyme 3.2.1 1.342
4ca5 3EFAngiotensin-converting enzyme 3.2.1 1.228
4ca7 3EFAngiotensin-converting enzyme 3.4.15.1 1.000
4ca6 3EFAngiotensin-converting enzyme 3.2.1 0.963
3bkk KAFAngiotensin-converting enzyme 3.2.1 0.921
2oc2 RX3Angiotensin-converting enzyme 3.2.1 0.897
2x96 RX3Angiotensin-converting enzyme 3.4.15.1 0.883
2xyd 3ESAngiotensin-converting enzyme 3.2.1 0.878
4ca8 3ESAngiotensin-converting enzyme 3.4.15.1 0.854
4bxk 1IUAngiotensin-converting enzyme 3.2.1 0.792
2x92 X92Angiotensin-converting enzyme 3.4.15.1 0.789
2x97 RX4Angiotensin-converting enzyme 3.4.15.1 0.760
1o86 LPRAngiotensin-converting enzyme 3.2.1 0.755
3nxq RX4Angiotensin-converting enzyme 3.2.1 0.752
2x93 X93Angiotensin-converting enzyme 3.4.15.1 0.711
4c2p X8ZAngiotensin-converting enzyme 3.2.1 0.709
1j36 LPRAngiotensin-converting enzyme 3.4.15.1 0.705
3aho 3A2Oligopeptidase / 0.690
2x94 X94Angiotensin-converting enzyme 3.4.15.1 0.688
3ahn 3A1Oligopeptidase / 0.663
2x91 LPRAngiotensin-converting enzyme 3.4.15.1 0.658
4pu2 PLUAminopeptidase N / 0.654