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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2xjj L81 Heat shock protein HSP 90-alpha

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2xjj L81Heat shock protein HSP 90-alpha / 1.076
2xjx XJXHeat shock protein HSP 90-alpha / 0.934
2xjg XJGHeat shock protein HSP 90-alpha / 0.898
2xab VHDHeat shock protein HSP 90-alpha / 0.871
3k98 1RCHeat shock protein HSP 90-alpha / 0.848
3k99 PFTHeat shock protein HSP 90-alpha / 0.827
2xht C0YHeat shock protein HSP 90-alpha / 0.804
3k97 4CDHeat shock protein HSP 90-alpha / 0.799
4egk RDCHeat shock protein HSP 90-alpha / 0.788
3inw JZBHeat shock protein HSP 90-alpha / 0.776
2yi6 6QMHeat shock protein HSP 90-alpha / 0.774
3eko PYUHeat shock protein HSP 90-alpha / 0.766
3ekr PY9Heat shock protein HSP 90-alpha / 0.763
1yc4 43PHeat shock protein HSP 90-alpha / 0.751
1yc1 4BCHeat shock protein HSP 90-alpha / 0.747
4bqj XKLHeat shock protein HSP 90-alpha / 0.747
2yi7 BZ8Heat shock protein HSP 90-alpha / 0.744
4e5i 0N9Polymerase acidic protein / 0.744
2bt0 CT5Heat shock protein HSP 90-alpha / 0.738
2yjw YJWHeat shock protein HSP 90-alpha / 0.727
1yc3 4BCHeat shock protein HSP 90-alpha / 0.725
2hkj RDCType 2 DNA topoisomerase 6 subunit B / 0.722
1qy8 RDIEndoplasmin / 0.721
2byi 2DDHeat shock protein HSP 90-alpha / 0.716
2ccu 2D9Heat shock protein HSP 90-alpha / 0.715
4egh 0OYHeat shock protein HSP 90-alpha / 0.702
1u0z RDCEndoplasmin / 0.698
2bsm BSMHeat shock protein HSP 90-alpha / 0.674
4mp2 PV1[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial 2.7.11.2 0.673
4ce2 BO5ATP-dependent molecular chaperone HSP82 / 0.668
2iwx M1SATP-dependent molecular chaperone HSP82 / 0.666
1bgq RDCATP-dependent molecular chaperone HSP82 / 0.664
2vci 2GJHeat shock protein HSP 90-alpha / 0.661
4e5f 0N7Polymerase acidic protein / 0.660
2yi5 YI5Heat shock protein HSP 90-alpha / 0.652
2brc CT5ATP-dependent molecular chaperone HSP82 / 0.651