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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2xjg XJG Heat shock protein HSP 90-alpha

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2xjg XJGHeat shock protein HSP 90-alpha / 1.079
2xjj L81Heat shock protein HSP 90-alpha / 0.898
2xjx XJXHeat shock protein HSP 90-alpha / 0.856
2xab VHDHeat shock protein HSP 90-alpha / 0.834
3k99 PFTHeat shock protein HSP 90-alpha / 0.803
2xhx T5MHeat shock protein HSP 90-alpha / 0.780
3k98 1RCHeat shock protein HSP 90-alpha / 0.746
4e5i 0N9Polymerase acidic protein / 0.744
2xht C0YHeat shock protein HSP 90-alpha / 0.743
3k97 4CDHeat shock protein HSP 90-alpha / 0.730
2bt0 CT5Heat shock protein HSP 90-alpha / 0.725
2xd6 XD6ATP-dependent molecular chaperone HSP82 / 0.715
3ekr PY9Heat shock protein HSP 90-alpha / 0.711
1qy8 RDIEndoplasmin / 0.707
4mp2 PV1[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial 2.7.11.2 0.697
3hhu 819Heat shock protein HSP 90-alpha / 0.695
2yjw YJWHeat shock protein HSP 90-alpha / 0.685
1u0z RDCEndoplasmin / 0.682
2yi7 BZ8Heat shock protein HSP 90-alpha / 0.682
2byi 2DDHeat shock protein HSP 90-alpha / 0.681
4egh 0OYHeat shock protein HSP 90-alpha / 0.676
4e5l DBHPolymerase acidic protein / 0.671
1yc4 43PHeat shock protein HSP 90-alpha / 0.670
2bsm BSMHeat shock protein HSP 90-alpha / 0.668
2wer RDCATP-dependent molecular chaperone HSP82 / 0.665
2xx2 13CATP-dependent molecular chaperone HSP82 / 0.663
2ccu 2D9Heat shock protein HSP 90-alpha / 0.658
3rlr 3RRHeat shock protein HSP 90-alpha / 0.657