Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 2qo6 | CHD | Fatty acid-binding protein 10-A, liver basic |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 2qo6 | CHD | Fatty acid-binding protein 10-A, liver basic | / | 1.123 | |
| 2qo4 | CHD | Fatty acid-binding protein 10-A, liver basic | / | 1.093 | |
| 4a84 | DXC | Major pollen allergen Bet v 1-A | / | 0.683 | |
| 1efz | PRF | Queuine tRNA-ribosyltransferase | 2.4.2.29 | 0.660 | |
| 1v2h | GUN | Purine nucleoside phosphorylase | 2.4.2.1 | 0.660 | |
| 2puc | GUN | HTH-type transcriptional repressor PurR | / | 0.660 | |
| 4e5i | 0N9 | Polymerase acidic protein | / | 0.660 | |
| 4e5l | DBH | Polymerase acidic protein | / | 0.660 | |
| 2jn3 | JN3 | Fatty acid-binding protein, liver | / | 0.656 | |
| 4z17 | PEP | Enolase | / | 0.652 |