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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2oc2 RX3 Angiotensin-converting enzyme 3.2.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2oc2 RX3Angiotensin-converting enzyme 3.2.1 1.308
4ca5 3EFAngiotensin-converting enzyme 3.2.1 1.001
2x96 RX3Angiotensin-converting enzyme 3.4.15.1 0.982
4ca6 3EFAngiotensin-converting enzyme 3.2.1 0.906
2xy9 3ESAngiotensin-converting enzyme 3.2.1 0.897
2xyd 3ESAngiotensin-converting enzyme 3.2.1 0.884
4ca7 3EFAngiotensin-converting enzyme 3.4.15.1 0.858
3bkk KAFAngiotensin-converting enzyme 3.2.1 0.854
2x93 X93Angiotensin-converting enzyme 3.4.15.1 0.789
2x97 RX4Angiotensin-converting enzyme 3.4.15.1 0.781
1uze EALAngiotensin-converting enzyme 3.2.1 0.757
3nxq RX4Angiotensin-converting enzyme 3.2.1 0.750
1o86 LPRAngiotensin-converting enzyme 3.2.1 0.742
3aho 3A2Oligopeptidase / 0.741
2x94 X94Angiotensin-converting enzyme 3.4.15.1 0.723
4bzr K26Angiotensin-converting enzyme 3.2.1 0.721
2x95 X95Angiotensin-converting enzyme 3.4.15.1 0.711
4ca8 3ESAngiotensin-converting enzyme 3.4.15.1 0.709
4c2p X8ZAngiotensin-converting enzyme 3.2.1 0.691
3ahn 3A1Oligopeptidase / 0.678
2x92 X92Angiotensin-converting enzyme 3.4.15.1 0.675
2x91 LPRAngiotensin-converting enzyme 3.4.15.1 0.672
3zxh E41Collagenase 3 3.4.24 0.658
2hpt BESAminopeptidase N 3.4.11.2 0.656
2zxg S23Aminopeptidase N 3.4.11.2 0.654
3ebi BEYM1 family aminopeptidase 3.4.11 0.652
1j36 LPRAngiotensin-converting enzyme 3.4.15.1 0.650