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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1zzq H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.918
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.913
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.913
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.912
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.912
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.912
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.912
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.912
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.912
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.911
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.911
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.911
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.911
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.911
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.911
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.910
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.910
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.910
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.910
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.910
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.910
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.909
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.908
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.907
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.907
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.907
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.907
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.907
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.906
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.905
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.905
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.904
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.904
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.903
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.894
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.894
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.893
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.893
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.893
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.893
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.893
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.893
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.892
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.892
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.891
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.891
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.891
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.891
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.890
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.890
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.890
3png H4BNitric oxide synthase, brain 1.14.13.39 0.890
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.890
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.890
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.890
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.890
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.890
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.889
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.889
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.889
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.887
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.887
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.887
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.887
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.886
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.886
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.885
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.878
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.876
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.874
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.874
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.874
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.873
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.872
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.872
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.870
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.869
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.867
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.866
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.862
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.859
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.857
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.852
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.852
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.849
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.849
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.841
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.825
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.824
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.804
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.802
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.792
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.789
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.778
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.734
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.724
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.722
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.720
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.708
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.705
3e7g H4BNitric oxide synthase, inducible 1.14.13.39 0.675
1r35 H4BNitric oxide synthase, inducible 1.14.13.39 0.663
1m8i H4BNitric oxide synthase, inducible 1.14.13.39 0.662
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.660
4e5f 0N7Polymerase acidic protein / 0.660
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.659
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.657
1m8h H4BNitric oxide synthase, inducible 1.14.13.39 0.657
3e67 H4BNitric oxide synthase, inducible 1.14.13.39 0.654