Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1uy8 PU5 Heat shock protein HSP 90-alpha

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1uy8 PU5Heat shock protein HSP 90-alpha / 0.919
1uyh PU0Heat shock protein HSP 90-alpha / 0.828
2h55 DZ8Heat shock protein HSP 90-alpha / 0.769
1uyk PUXHeat shock protein HSP 90-alpha / 0.765
1uyf PU1Heat shock protein HSP 90-alpha / 0.760
2fwz H71Heat shock protein HSP 90-alpha / 0.759
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
4e5i 0N9Polymerase acidic protein / 0.744
2fwy H64Heat shock protein HSP 90-alpha / 0.738
3o0i P54Heat shock protein HSP 90-alpha / 0.733
1uy7 PU4Heat shock protein HSP 90-alpha / 0.732
4z1f H71Heat shock protein 75 kDa, mitochondrial / 0.716
1uym PU3Heat shock protein HSP 90-beta / 0.712
1uyd PU8Heat shock protein HSP 90-alpha / 0.683
2ykb YKBHeat shock protein HSP 90-alpha / 0.666
4e5f 0N7Polymerase acidic protein / 0.660
2yki YKIHeat shock protein HSP 90-alpha / 0.659
1uyc PU7Heat shock protein HSP 90-alpha / 0.658