Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1pjk ANP Casein kinase II subunit alpha 2.7.11.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1pjk ANPCasein kinase II subunit alpha 2.7.11.1 0.891
5cvf ATPCasein kinase II subunit alpha 2.7.11.1 0.701
4y0x ADPSerine/threonine-protein kinase PknG 2.7.11.1 0.699
4y12 AGSSerine/threonine-protein kinase PknG 2.7.11.1 0.689
5cvh ADPCasein kinase II subunit alpha 2.7.11.1 0.675
1lp4 ANPCasein kinase II subunit alpha 2.7.11.1 0.668
4uak ADPSerine/threonine-protein kinase MRCK beta 2.7.11.1 0.668
3x2u ATPcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.661
3a99 ANPSerine/threonine-protein kinase pim-1 2.7.11.1 0.658
3c50 ADPRhodopsin kinase / 0.656
3qc9 ADPRhodopsin kinase / 0.656
5dr2 ATPAurora kinase A 2.7.11.1 0.653
1ol6 ATPAurora kinase A 2.7.11.1 0.650
3g8c ADPBiotin carboxylase 6.3.4.14 0.650