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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1f3b GBX Glutathione S-transferase A1 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1f3b GBXGlutathione S-transferase A1 2.5.1.18 1.535
3ktl GTXGlutathione S-transferase A1 2.5.1.18 0.950
1k3l GTXGlutathione S-transferase A1 2.5.1.18 0.900
2r3x GTXGlutathione S-transferase A1 2.5.1.18 0.886
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 0.857
1pgt GTXGlutathione S-transferase P 2.5.1.18 0.855
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.855
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.837
1k3y GTXGlutathione S-transferase A1 2.5.1.18 0.831
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.827
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.823
3l0h GTXGlutathione S-transferase A1 2.5.1.18 0.818
2aaw GTXGlutathione S-transferase 2.5.1.18 0.813
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.812
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.804
4hj2 LZ6Glutathione S-transferase A1 2.5.1.18 0.799
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.796
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.788
2pgt GPRGlutathione S-transferase P 2.5.1.18 0.784
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.777
12gs 0HHGlutathione S-transferase P 2.5.1.18 0.762
2glr GTXGlutathione S-transferase P 1 2.5.1.18 0.756
3ik9 BOBGlutathione S-transferase A1 2.5.1.18 0.754
3pgt GBXGlutathione S-transferase P 2.5.1.18 0.742
2imk GTXAGAP009194-PA / 0.732
4gss GTXGlutathione S-transferase P 2.5.1.18 0.705
1gss LEEGlutathione S-transferase P 2.5.1.18 0.694
3fyg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.693
2gsq GBIGlutathione S-transferase 2.5.1.18 0.692
1aqx GTDGlutathione S-transferase P 2.5.1.18 0.690
1guh GSBGlutathione S-transferase A1 2.5.1.18 0.686
1pl2 ABYGlutathione S-transferase A1 2.5.1.18 0.684
2c4j GSOGlutathione S-transferase Mu 2 2.5.1.18 0.679
1vf2 GTXGlutathione S-transferase 3 2.5.1.18 0.677
3f63 GTXGlutathione transferase GST1-4 / 0.675
1m9a GTXGlutathione S-transferase class-mu 26 kDa isozyme 2.5.1.18 0.670
1gnw GTXGlutathione S-transferase F2 2.5.1.18 0.666
4iji 99TGlutathione S-transferase-like protein YibF / 0.665
1mtc GPRGlutathione S-transferase Mu 1 2.5.1.18 0.660
2f3m GTDGlutathione S-transferase Mu 1 2.5.1.18 0.654
4gst GTDGlutathione S-transferase Mu 1 2.5.1.18 0.654